| Entry |
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| Symbol |
DDX58
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| Name |
(RefSeq) probable ATP-dependent RNA helicase DDX58
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| KO |
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| Organism |
cbrc Corvus brachyrhynchos (American crow)
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| Pathway |
| cbrc04622 | RIG-I-like receptor signaling pathway |
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| Brite |
KEGG Orthology (KO) [BR:cbrc00001]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103616425 (DDX58)
04623 Cytosolic DNA-sensing pathway
103616425 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103616425 (DDX58)
05168 Herpes simplex virus 1 infection
103616425 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:cbrc04054]
103616425 (DDX58)
Enzymes [BR:cbrc01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103616425 (DDX58)
Pattern recognition receptors [BR:cbrc04054]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103616425 (DDX58)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
819 aa
MLEIDPVAIMPYINTCLIERECDEILQISEYRSKAAGITKLIECLCRSDKENWPKSLQLA
LDNAGYYNASELWNITEDNGEGVDGEITDASENYFETIMTFSEEAECDNLSENLSSVSER
VYESSSVNEPKKARSYQIELAQPAIDGKNTLICAPTGSGKTFVALLICEHHLQNVPSGRK
AKVVFLATKLPVYEQQKNVFRQHFERSGYSVQGICGETVANICVENVIQDSDIIVLTPQI
LVNSIEKGILSSLSIFTLMIFDECHNTTGNHPYNVLMTRYLDQKFDSSGNQLPQIVGLTA
SVGVGNAKSMNETVEHICTLCSYLDIQTISTVRENKQDLQRFGNKPETHIRWVKMRAQNH
FADIISGLMSETQVLMRKIYSVDTISQINKNYFGTQRYEHWIVVTQKKCRLLQLEDKEKE
SNICRDLFICTEHLRKFNDALIISEDARIEDALAYLNEFFTNVKNGPYTELEKQLTDKFQ
EKEPELTALSKDESNENPKLEELACILDEAYRYNPQTRTILFAKTRALVAALKKWIEANP
LLSHIKPDVLMGKGSKDHTTGMTLPMQKGVLDAFRNDKDIRLLIATSVADEGIDIAECNL
VVLYEYFGNVTKMIQVRGRGRARDSKCILVTSKREVVENEKQNSYKEEMMNAAIEKLQNW
DETTFARKIRDLQMKEKKLRDSRKNETKYKVVEGKINLLCGKCKAYACSTDDIRVIKESH
HTVLGDAFKERYITKPHSKLVQFDGFEKKSKMHCRNTDCQHDWGITVKYKTFDNLPVIKI
KSFVLENVETGTQMDFQKWRSINFFLKNFDEENDLNSTF |
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| NT seq |
2460 nt +upstreamnt +downstreamnt
atgctagaaattgatccggtagcaatcatgccatacataaacacatgcctgatagagagg
gagtgtgatgagatcctgcagatcagtgaatacagaagcaaagcagccgggataactaaa
ctcattgaatgcctctgtcgctcggataaggaaaactggcccaaaagtcttcagctggca
ttggataatgcagggtattacaatgcaagtgaactgtggaatataacagaagataatggc
gaaggtgttgatggtgaaataacagatgcctctgagaattactttgaaaccattatgaca
ttttctgaagaagcagaatgtgataatctcagtgaaaatctctcttcagtttccgaaagg
gtctatgagtcttcatctgttaatgaaccaaagaaggctcggagctaccagattgagctt
gcacagcctgccattgatgggaaaaacacattgatttgtgcccccacaggatctggaaaa
acttttgtggcacttctgatttgtgagcatcatttgcaaaacgttccttcaggacgaaag
gcaaaagtggtcttccttgcaaccaaactgccagtgtatgagcaacagaaaaatgtattc
aggcagcattttgaaagaagtggatactctgttcagggaatttgtggtgaaacagttgca
aatatctgtgtagaaaatgttatacaggacagtgacatcattgtgctaacaccccagatt
cttgtgaatagcatagagaaagggatccttagctccctctccatcttcactctgatgata
tttgatgagtgccacaacactacaggcaaccacccttacaatgtgttgatgaccagatac
ctggatcaaaaatttgactcctctggaaaccagctgcctcagattgtaggtttaactgct
tctgttggagttggtaatgccaagagcatgaatgaaactgtagagcacatctgtaccctc
tgctcctaccttgacatacagaccatatccactgtcagagagaacaaacaagatctgcag
aggtttggaaacaagccagaaacacatatcaggtgggttaaaatgcgagctcagaatcac
tttgcagacattatctcaggtctgatgtctgagacacaggtgttgatgaggaagatttac
tcagtggataccatctcccaaatcaacaagaattactttgggacacagagatatgaacac
tggatagttgtcactcagaagaaatgcagactgctgcaactggaagataaggagaaggag
agcaacatttgtagagaccttttcatttgtactgaacacttgcggaaattcaatgacgct
ctcattatcagtgaagatgcccgcatcgaagatgctttagcctacctaaatgaatttttc
acaaatgtaaaaaatggaccatatacagagttagagaagcaactgacagacaaatttcaa
gagaaggaaccagagctgactgccctttcaaaagatgagtcaaatgagaatccaaagctg
gaagagcttgcttgcatcctggacgaagcataccgctataatccacagactcgcactatt
ctctttgccaagacaagggctttagtcgctgctttgaagaagtggatagaagcaaaccct
ctacttagccacataaagccagatgtgttgatgggtaagggaagtaaagatcatacaaca
ggtatgaccctgccaatgcagaagggtgtactggatgcattcagaaatgacaaggatatc
agactgctaattgctacatctgttgctgacgaaggcattgatattgctgagtgcaacctt
gtggtgctctatgaatacttcggtaatgtcaccaaaatgatccaagtgagaggtcgtgga
agggcaagagacagcaagtgcatccttgtgacaagcaaaagagaagtggttgagaatgaa
aaacaaaacagttataaggaagaaatgatgaatgcagctattgaaaagctacagaactgg
gatgaaacaacatttgcaagaaagatacgtgacctgcaaatgaaggaaaagaaactacga
gattccaggaagaatgaaacaaaatataaagtagtggaagggaaaataaatcttttatgt
ggaaaatgcaaagcatatgcctgcagtacagatgacatcagagttataaaggaatctcat
cacactgtcctaggtgatgcattcaaggagcgttatataacaaagcctcacagcaaactg
gttcagtttgatggttttgagaaaaaaagcaagatgcattgccgaaatactgactgccag
catgattgggggattacagtgaagtacaagacatttgataacctaccagtgatcaaaatc
aaaagctttgtactagagaatgttgaaactgggacacaaatggattttcagaaatggaga
agtattaatttctttttgaagaattttgatgaagaaaatgacctcaactcaacattttaa |
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