Corvus brachyrhynchos (American crow): 103618197
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Entry
103618197 CDS
T08418
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103618197 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbrc03400
]
103618197 (TDG)
Enzymes [BR:
cbrc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
103618197 (TDG)
DNA repair and recombination proteins [BR:
cbrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103618197 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
103618197
NCBI-ProteinID:
XP_017593467
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MMTAVPNMEMMTEQPTLEGIPEPNIAQEPPKEVKKGGRKRKAKATEPKQPKKPAAKKEKP
AKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYK
GHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEF
REGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNLEFGLQPHKVPDTETLCYV
MPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGITPNTDVQEVQYTFDLQLAQEDAKKMA
VKEEKYDPGYEAAYGGAYCDRAPYDTEQCSFSSNGAGKVLGAFHSTVKGHPLVKFLMDSG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgcagtgcccaacatggaaatgatgactgagcagccgactctagagggcatt
ccagagccaaacattgctcaggagcctccaaaagaagttaaaaaaggaggaaggaaaaga
aaagccaaagcaactgagccaaagcaacccaaaaagcctgctgctaaaaaagaaaaacca
gccaagtcaaaaggcaaacaagaaaagatcacagatacttttaaagtcaaaagaaaagtg
gaccgttttaatggtgtatctgaagctgaacttctgaccaagactttgcctgatattttg
acctttgatctggatattgtgataattggcataaaccctggcctgatggcagcttacaaa
ggacatcattacccgggacctggaaaccatttttggaagtgtctcttcatgtctggtcta
agtaatgaacagctgaaccacatggatgaccacaccttgccacataaatatgggattgga
tttacaaacatggttgaaaggacaacacctggaagcaaagacctctccagcaaagagttt
cgggaaggagggcgaattctgatgcagaagctacaaaagtataaacctcgtatagcagct
ttcaatggaaaatgtatttatgaaatttttagtaaagaagtttttggaattaaagttaag
aacttggaatttgggcttcagccacacaaagtgccagatacagaaactctctgctacgtt
atgccatcgtccagtgcaagatgtgctcagtttcctcgggcacaagataaagttcattat
tacataaagctgaaggacttaagggatcaactaaagggcatcacacccaacacagatgtg
caggaggtgcagtacacatttgacttgcaacttgcacaagaggatgctaaaaagatggct
gtcaaagaggagaagtatgacccaggctatgaagcagcatatggaggagcttactgtgac
cgtgcaccatatgacactgaacagtgcagcttctcttcaaatggagctggtaaagtgctt
ggggcattccacagtactgtgaagggtcatcctttggtgaagttcctaatggacagtgga
tga
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