Corvus brachyrhynchos (American crow): 103619600
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Entry
103619600 CDS
T08418
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc00310
Lysine degradation
cbrc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103619600 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103619600 (SETDB1)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
103619600 (SETDB1)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103619600 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103619600 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
YkyA
Motif
Other DBs
NCBI-GeneID:
103619600
NCBI-ProteinID:
XP_017595567
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MEEMDSQDIKELQQEVMEELGISMEELQEIIDKEVENSEWVRQRKQQLEELEQCMRHKEE
EVAHVDQLIDDAMRAINKCETLAKELYSMIGLQYRESSSEDEAPAAAEVIEIPDEEDDDV
MSVDSGWKRSSSSPRISRDQSLLREAMVAMRKSARDVAKFMDAVSKKTSLQEAQKDVQPP
QESPGAAQPVIVPAAPENDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKV
KFDNKGKSLLSGNHIAYDYHPSAERHHVGRRVVARYKDGNQMWLYAGIVAETPNVKNKDR
FLIFFDDGYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQ
LIKTEWEGTWWKSRVEEVDGSLVKILFLEALPTGTVSVPFSFPQEDKRCEWIYRGSTRLE
PMFSMKTSTASTQEKKQSGQTRTRPNVGAVRSKGPVVQYTQDLAGAGPQYKTPEQPPAAR
PASPQPAEMECSDNQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLSDAPAAGRALPAP
QHRLPSSGPSQPFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSRN
PLLIPLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCLRSMQEIERYLFETDCDFLFLEMF
CLDPYVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGVY
INTSWEFLVGCDCKDGCRDKSRCACHQLTIQASGCTPGGQINPNSGYQHKRLEECLPTGV
YECNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILT
DDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDNSGVDLKDDDDDENTGTDE
LEESNEDSSDDNFCKDESFSTSSVLRSYATRRQTRGQRDHGLSETASKDSGLTRPLGHDE
PAMAPPCKLPVSEETSKNKVASWLSSNSMAESFQDNDGASSFRVGEGGEVKAVKMEVAAE
REKGCAATQGDLNGEAKAAKKEEPEESTKISRLSSLERRYGYNPCPPKLEGIRRPVSGMV
MLQNRRRSLAPPPPSEDVLTLSSSTDSDGENGQAPGRANDSDDIQTISSGSEEEEGEDKK
NPSSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTPLAAADKGESAGPVRRSTRQFYDGEE
NCYIIDAKLEGNLGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDY
NYEVGSVEGKELLCCCGAIDCRGRLL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatggattcccaggacatcaaagagctgcagcaggaggtgatggaggagctg
ggaatctctatggaggagctgcaggagatcatcgacaaagaagtggagaattccgagtgg
gtgaggcagcggaagcagcagctggaggagctggagcagtgcatgaggcacaaggaggag
gaggtggcccacgtcgaccagctcattgacgatgccatgagggccatcaacaagtgcgag
acgctggccaaggaattgtattccatgatcggcctccagtaccgggagagcagctccgag
gacgaggcgccggcggccgccgaggtcatcgagatcccggacgaggaggacgacgacgtc
atgagcgtggactcgggctggaagcgcagcagcagcagtcccagaatctccagagatcag
agtctgctgcgggaagccatggttgccatgaggaaatctgcccgggacgttgcgaaattc
atggatgctgtcagcaagaaaacgagcttgcaggaagcacagaaagatgtacaaccccct
caggaatctcctggcgctgcccagcccgtcattgtccctgcagcccctgagaatgacctc
aacactgatggggacctcaaagtgggcatgaggattttggggaaaaaaagaaccaaaacg
tggcacaaggggacgttgattgccatccagacggtcggtgctggcaagaaatacaaggtg
aagtttgataataaaggaaagagtttgctctcgggcaaccacattgcctacgattaccac
ccctctgccgagaggcaccacgtgggcaggagggtggtggccaggtacaaggatggcaat
cagatgtggctctatgctggcatcgtggctgagacccccaacgtcaagaataaagacagg
ttcctgatcttcttcgacgacggctacgcgtcgtacgtgaaggagtgggagctgtacccg
gtctgccggccactgaaaaaagcctgggaagacattgaggatgtttcctgccgggatttc
atcgaggaatacatcactgcctaccccaaccggcccatggtgctgctgaagaatgggcag
ctgatcaaaactgagtgggaagggacctggtggaaatccagagtggaagaagtggatgga
agtctggtcaaaatccttttcctggaagctctacccacggggactgtgagcgttcccttc
tcgttccctcaggaggataaacgttgtgagtggatttaccgaggttccacacgcctcgag
cccatgttcagcatgaaaacttccacagcttctacccaggaaaagaagcaaagtgggcaa
accaggactcgtcccaatgttggtgctgtgaggagcaagggccctgtggtccagtacacc
caggatttagcaggagctggtccccagtacaagactccggagcagcctccagctgcccgc
cctgcctctcctcagcctgcagagatggaatgctccgacaaccagctggcccagggcaga
aagcaggtggccaagaaaagcacttccttccgtcctggctccgtgggctccgggcactcg
tccccatcctcccccgtcctcagcgatgccccagcagccgggagggccctgccggccccg
cagcaccgtctccccagcagcggtccctcccagcccttccacgggatgatggaccgcgtt
cccaacgagccatcctaccgggcccctctggagaagctcttctacctgccccacgtgtgc
agctacacgtgcctgtcgcgggtgcggcccatccgcagcgatcagtaccgcagccgcaac
ccgctgctcatcccgctgctctacgacttccgccgcatgacggcgcggcgccgcgtcaac
cgcaagatgggcttccacgtgctctacaaaaccccctgcgggctctgcctgcgctccatg
caggagatcgagcgctacctcttcgagacggactgcgacttcttgttcctggagatgttc
tgcttggatccctacgtgctggtggatcgcaagttccagccttacaagccttactactac
atcgccgacatcaccaagggcaaggaggacgtgccgctgtcgtgcgtcaacgagatcgac
aacaccccgccgccgcaagtggcctacagcaaggagaggattcccggcaagggggtgtac
atcaataccagctgggagttcctcgtgggctgtgactgcaaggatggctgcagagacaaa
tccaggtgtgcctgtcaccagctgaccatccaggccagcggctgcacccccggagggcaa
atcaaccccaactcgggctaccagcacaagcggctggaggaatgtctcccaacaggcgtt
tacgagtgcaacaagaggtgcaagtgcaacgtgaacatgtgcaccaaccgcctggtgcag
cacggcctccaggtgcgcctgcagctcttcaagacccagaacaaaggttggggcattcgc
tgcctcgatgacatcgccaagggctcctttgtctgcatctacgcagggaaaatcctcacg
gatgacttcgctgacaaagaggggctggagatgggcgacgagtacttcgccaacctggac
cacatcgagagcgtggagaacttcaaggagggctacgagagcgacgccaagtgctcctcg
gacaacagcggcgtggacctcaaggacgacgacgacgacgagaacacgggcacggacgag
ctggaggaatccaacgaggacagctccgacgacaacttctgcaaggacgagagcttcagc
acgagctcggtgctgcgcagctacgccacgcgccggcagacgcgcggccagcgcgaccac
ggcctctcggagacggcctccaaggactcggggctcacgcggcccctcggccacgacgag
cccgccatggccccgccctgcaagctgcccgtgtccgaggagacctccaagaacaaagtg
gcctcgtggctgagctccaacagcatggccgagagcttccaggacaacgacggcgcttcg
tccttcagggtgggcgaagggggagaagtcaaagctgtgaaaatggaggtggctgcggag
agggagaagggctgcgctgccacgcagggagatctgaacggagaggcaaaggcagccaag
aaggaggaacctgaagaatcgaccaaaatttccaggctgagcagcctggaaaggaggtac
ggctacaacccctgcccccccaagctggaggggatccggaggccggtgagtgggatggtg
atgctgcagaaccgccggcgatccctggccccgccgcccccctcggaggacgtgctgaca
ctgtccagcagcaccgacagcgacggggagaacgggcaggccccgggcagggccaacgac
agcgacgacatccagaccatttcctcgggatctgaggaggaggaaggggaggacaagaaa
aatccatcatctgggtcaggtcccgtgaagagacaggtggctgtgaaatccacccgaggc
ttcgccctcaagtccacccacggcatcgccatcaaatccacgccgctggcagcggccgac
aagggcgagagcgcggggcccgtgcgccgcagcacgcggcagttctacgacggcgaggag
aactgttacatcatcgatgccaagctcgagggcaacctgggccgctacctcaaccacagc
tgcaccccaaacctcttcgtgcagaacgtcttcgtggacacccacgaccttcgcttcccc
tgggtcgccttcttcgccagcaagcggatccgagccggcacggagctgacctgggattac
aactacgaggttggcagcgtggagggcaaggagctgctgtgctgctgcggggccatcgac
tgccggggccggctgctctga
DBGET
integrated database retrieval system
