Corvus brachyrhynchos (American crow): 103620910
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Entry
103620910 CDS
T08418
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04010
MAPK signaling pathway
cbrc04120
Ubiquitin mediated proteolysis
cbrc04140
Autophagy - animal
cbrc04144
Endocytosis
cbrc04620
Toll-like receptor signaling pathway
cbrc04621
NOD-like receptor signaling pathway
cbrc04622
RIG-I-like receptor signaling pathway
cbrc05132
Salmonella infection
cbrc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103620910 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103620910 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103620910 (TRAF6)
04140 Autophagy - animal
103620910 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103620910 (TRAF6)
04621 NOD-like receptor signaling pathway
103620910 (TRAF6)
04622 RIG-I-like receptor signaling pathway
103620910 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103620910 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
103620910 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103620910 (TRAF6)
04121 Ubiquitin system [BR:
cbrc04121
]
103620910 (TRAF6)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103620910 (TRAF6)
Membrane trafficking [BR:
cbrc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
103620910 (TRAF6)
Ubiquitin system [BR:
cbrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
103620910 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-TRAF_2
zf-C3HC4_4
zf-RING_5
Sina_ZnF
SlyX
PspA_IM30
Med21
TRAF3_RING
RING_XB3-XBAT31
zf-RING_11
DUF16
DUF4455
CENP-F_leu_zip
HAP1_N
U-box
CEP104_ZnF
Spc29
ATG16
Myosin_tail_1
UPF0242
DUF1664
HMMR_N
PUMA_CC
DM
ADIP
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
103620910
NCBI-ProteinID:
XP_017597093
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MSLLHSDSSCGARDGDSGWGTSAGNPPSSFSEETQGYDVEFDPPLESKYECPICLMALRE
AVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLTVKCPNKGC
SMKMELRHLEDHQLQCDFSTVECPQCQGTFPKNHLKEHMTQECPRRQVCCPNCATSMAYE
DKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPVPCFYSAFGCPEKMQRNELA
RHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPALFSHVSHAAYDCNPEVENFK
ETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRSLEGKITEMEAQQCNGIYIWK
IENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQG
EYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQRPTIHRNPKGFGYVTF
MHLQNLKQRTFIKDDTLLVRCEVLTRLDLNSVRREGFQARSTDGAM
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgcacagtgacagcagctgtggagcccgagacggggacagcggctggggc
accagcgctggcaacccgcccagctctttctcagaggagacacaaggatacgacgtggag
ttcgatccgcccctggaaagtaaatatgagtgtcccatctgtctgatggctctccgggaa
gcagtgcagaccccgtgtggccaccgtttctgcaaaggctgcattgtcaaatcaatcaga
gatgcaggtcacaaatgtcctgtagacaatgaaattctgcttgaaaatcaactttttcct
gacaacttcgccaaacgggaaatcctttcattaacggttaagtgtcccaacaagggctgc
agtatgaagatggagctcaggcacttagaggaccaccagctgcagtgtgatttttccact
gtggaatgcccacagtgccaaggaaccttcccaaagaaccatctgaaggagcacatgacc
caggagtgtccaaggcgccaagtgtgttgcccaaactgtgccacatctatggcctatgaa
gataaagagcttcatgaccaaacctgcccacttgccaatgtattttgtgaatattgcaac
acagtgctcatcagagagcagatgcctaaccattatgacaatgattgtcctactgccccg
gtaccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggca
cgacatatgcaggagttcactcaggttcacatgagaatgatggctcagagtttccagaac
attagtgtcactgctgcaaatcctgtacccttcatcaatggcctacccttcgagcctgcc
ctcttctcacatgtgtcacatgctgcatatgactgcaatccagaagttgaaaacttcaag
gaaactattcagcagttggaaggtcgtctggtaagacaagatcaccaaatcagggaactc
attgctaaaatggagactcagaacactcacatggcagaactcaaacgtactatccgaagc
ttggagggaaagattactgaaatggaggcacagcaatgtaatggtatttatatctggaag
attgagaacttcagtggactgcagaaagcccaggaagaagagagacctgtagtgatgcac
agtcctggcttctatacggggaagcctggctacaagctgtgcttgcgcctgcatatccag
ttaccaaatgctcagcgctgcgctaattttatctctctgttcgtccacactatgcaaggg
gaatatgacagccacctgccctggcctttccaaggcaccatacgactttctattttggat
caatcagaagggccggaaaggcagaaccatgaagaggtgatggaagccaagccagagcta
ctggctttccagagaccgacaattcaccgcaatcccaaaggttttggttatgtgactttc
atgcacctgcagaacttgaaacagagaaccttcatcaaggatgacacgctcctggtgcgc
tgcgaggttctaacgcgcctggacttgaacagtgtccgcagagaaggcttccaggcccgc
agtactgatggagccatgtag
DBGET
integrated database retrieval system