Corvus brachyrhynchos (American crow): 103620910 Help Entry 103620910         CDS       T08418                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism cbrc  Corvus brachyrhynchos (American crow) Pathway cbrc04010   MAPK signaling pathway cbrc04120   Ubiquitin mediated proteolysis cbrc04140   Autophagy - animal cbrc04144   Endocytosis cbrc04620   Toll-like receptor signaling pathway cbrc04621   NOD-like receptor signaling pathway cbrc04622   RIG-I-like receptor signaling pathway cbrc05132   Salmonella infection cbrc05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cbrc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     103620910 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     103620910 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     103620910 (TRAF6)    04140 Autophagy - animal     103620910 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     103620910 (TRAF6)    04621 NOD-like receptor signaling pathway     103620910 (TRAF6)    04622 RIG-I-like receptor signaling pathway     103620910 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     103620910 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     103620910 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cbrc04131]     103620910 (TRAF6)    04121 Ubiquitin system [BR:cbrc04121]     103620910 (TRAF6) Enzymes [BR:cbrc01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      103620910 (TRAF6) Membrane trafficking [BR:cbrc04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     103620910 (TRAF6) Ubiquitin system [BR:cbrc04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     103620910 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-TRAF_2 zf-C3HC4_4 zf-RING_5 Sina_ZnF SlyX PspA_IM30 Med21 TRAF3_RING RING_XB3-XBAT31 zf-RING_11 DUF16 DUF4455 CENP-F_leu_zip HAP1_N U-box CEP104_ZnF Spc29 ATG16 Myosin_tail_1 UPF0242 DUF1664 HMMR_N PUMA_CC DM ADIP zf_UBZ Motif Other DBs NCBI-GeneID:  103620910 NCBI-ProteinID:  XP_017597093 LinkDB All DBs Position Unknown AA seq 526 aa AA seqDB search MSLLHSDSSCGARDGDSGWGTSAGNPPSSFSEETQGYDVEFDPPLESKYECPICLMALRE AVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLTVKCPNKGC SMKMELRHLEDHQLQCDFSTVECPQCQGTFPKNHLKEHMTQECPRRQVCCPNCATSMAYE DKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPVPCFYSAFGCPEKMQRNELA RHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPALFSHVSHAAYDCNPEVENFK ETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRSLEGKITEMEAQQCNGIYIWK IENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQG EYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQRPTIHRNPKGFGYVTF MHLQNLKQRTFIKDDTLLVRCEVLTRLDLNSVRREGFQARSTDGAM NT seq 1581 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctgcacagtgacagcagctgtggagcccgagacggggacagcggctggggc accagcgctggcaacccgcccagctctttctcagaggagacacaaggatacgacgtggag ttcgatccgcccctggaaagtaaatatgagtgtcccatctgtctgatggctctccgggaa gcagtgcagaccccgtgtggccaccgtttctgcaaaggctgcattgtcaaatcaatcaga gatgcaggtcacaaatgtcctgtagacaatgaaattctgcttgaaaatcaactttttcct gacaacttcgccaaacgggaaatcctttcattaacggttaagtgtcccaacaagggctgc agtatgaagatggagctcaggcacttagaggaccaccagctgcagtgtgatttttccact gtggaatgcccacagtgccaaggaaccttcccaaagaaccatctgaaggagcacatgacc caggagtgtccaaggcgccaagtgtgttgcccaaactgtgccacatctatggcctatgaa gataaagagcttcatgaccaaacctgcccacttgccaatgtattttgtgaatattgcaac acagtgctcatcagagagcagatgcctaaccattatgacaatgattgtcctactgccccg gtaccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggca cgacatatgcaggagttcactcaggttcacatgagaatgatggctcagagtttccagaac attagtgtcactgctgcaaatcctgtacccttcatcaatggcctacccttcgagcctgcc ctcttctcacatgtgtcacatgctgcatatgactgcaatccagaagttgaaaacttcaag gaaactattcagcagttggaaggtcgtctggtaagacaagatcaccaaatcagggaactc attgctaaaatggagactcagaacactcacatggcagaactcaaacgtactatccgaagc ttggagggaaagattactgaaatggaggcacagcaatgtaatggtatttatatctggaag attgagaacttcagtggactgcagaaagcccaggaagaagagagacctgtagtgatgcac agtcctggcttctatacggggaagcctggctacaagctgtgcttgcgcctgcatatccag ttaccaaatgctcagcgctgcgctaattttatctctctgttcgtccacactatgcaaggg gaatatgacagccacctgccctggcctttccaaggcaccatacgactttctattttggat caatcagaagggccggaaaggcagaaccatgaagaggtgatggaagccaagccagagcta ctggctttccagagaccgacaattcaccgcaatcccaaaggttttggttatgtgactttc atgcacctgcagaacttgaaacagagaaccttcatcaaggatgacacgctcctggtgcgc tgcgaggttctaacgcgcctggacttgaacagtgtccgcagagaaggcttccaggcccgc agtactgatggagccatgtag

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