Corvus brachyrhynchos (American crow): 103621934
Help
Entry
103621934 CDS
T08418
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04514
Cell adhesion molecules
cbrc04520
Adherens junction
cbrc04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103621934 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
103621934 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
103621934 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbrc01009
]
103621934 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbrc04515
]
103621934 (PTPRF)
Enzymes [BR:
cbrc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
103621934 (PTPRF)
Protein phosphatases and associated proteins [BR:
cbrc01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
103621934 (PTPRF)
Cell adhesion molecules [BR:
cbrc04515
]
Immunoglobulin superfamily
Type II RPTP family
103621934 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
DSPc
V-set
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
103621934
NCBI-ProteinID:
XP_017598971
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MVPNFCIPVLTVPAAIFCCLMLPFVRADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTLYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFQVIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVRWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHFTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPTS
QERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTV
EARTAQSTPSAPPQEVECVSTSSTTVRVSWVPPPAQSRNGVITQYSIAYQAVEGDDITKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPQSIPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYLVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDS
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRD
INSQQDLVNMTKDTSITLTNLKPDTTYNIKVRARTSKGAGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTRTLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEM
RRLNYQTPGASVPCCPNISSMRDHPPIPVSDLSDNIDRLKANDGLKFSQEYESIDPGQQF
TWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQG
PLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVEL
ATYTVRTFALYKNGSSEKTELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMV
VHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALL
EAATCGNTEVPARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNK
FKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR
TGVFITLSIVLERMRYEGVVDMFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHY
AT
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcttctgctgcttg
atgctgccttttgtaagagcggacagcaagccaacgtttatgaaagctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgcgttcatcgagatgaa
gctatctatgagtgcacagccaccaatagtgttggggagataaacacgagtgccaagtta
acagtgttagaagaggaccacctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacaatgctctgtgctgccagtggtaaccct
gatcccgaaatctcctggttcaaggacttcctgcccgtcgacactgcaaccagcaatggg
cgaatcaagcaactccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agcgaggaatcagaccaaggcaaatatgaatgtgttgcaaccaacagcgcaggaaccctc
tactctgccccagccaacctttatgttcgagtgcggcgtgttgctcctcgattctctatc
cctccgagcaaccatgaggtgatgcctggggggagcgtgaacctcacatgcgtggcagta
ggtgctccaatgccctatgtgaagtggatggctggtgtggaggaactgaccaaagaagat
gagatgcccgtcggtaggaatgttctggaactgaataacatcatgcagtctgccaactac
acctgcgtggccatctcttcccttggcatgattgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacgacagctaccagcgtgacc
ctcacctgggattcgggcaactctgaccccatttcatattacgtcatccagtacaagccc
aaatccttggagggccagttccaggaggtggatggtgtggcaacaacccgctatagcata
ggtgggctcagccccttctcagagtatgagttccaggtcatcgcagtcaataacatcggc
aggggtccccccagtgaactggtcgaggcccggacaggagaacaagctccttcaagtcct
cccctcaaagtccaggcacggatgctgagcgccagcaccatgctggtccggtgggagcag
ccggaggagcccaacggacagatccgagggtaccgcgtgtactacaccaccgacccccac
ctgcctctgagcatgtggcagaaacacaacactgacgacagccacttcaccaccgtgggc
agcctcatcacaggcaccacctacagcatccgcgtcctggccttcacttcggtgggcgac
gggcccccctcggacatcatccaggtcaaaacacagcaaggggttcctgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctgttgacctggctgcccacctct
caggaacgcattactaaatatgagctgctgtactgggaaggggaggatggcactcagcaa
aaggtggagtttgacccaacctcctcatatgctgtggaaggtctcaaaccggacacattg
tataagttccgtctgggtgcgcgctcagagctgggggtaggagtttacacccccacagtc
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccaccaccgtccgggtaagttgggtgccaccgcccgcccagagccgcaatggg
gtcatcacccagtactccattgcctaccaggcagtggaaggagatgacatcaccaagcat
gtggtggatggcattggacgggagcattccagctgggagatcaaggacctggagaaatgg
accgagtacaaggtgtgggtaagggctcacaccgatgtggggccaggaccacagagcatc
cccgtgcacgtgcgcactgacgaggatgtgcccagtgccccaccacgaaaggtggaggtg
gagtctgtgaattcgactgccatccgggtgagctggaagctgcccatctccaacaaacag
catgggcagatccgcgggtatctggttacctatgtgaagctggaaaacaacgagccccga
gggcagccagtgatcaaggacgtcatgctgtcagaagcacagtggagagctgaggactcc
gtcgaccatgagacagtcattggaggcctgctgccagaaaccacctactctgtcacagtt
gctgcctacaccaccaaaggagatggtgcccgcagcaagcccaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgtctggatgaggaaaaaatgaacacgatagacttcgggaagagagaccatcactac
acggtgaccaacctgcacaagggggccacgtacctcttcaaattgtctgctaagaacaga
gctggcccaggagaggagtttgagaaggagatcacgacggccgaagatgtgccaagcggc
ttcccacagaacctgcgtgtggtgggtctcactacttccaccacagaagttgcttgggac
cccccagtcttggcagaaaggaacggcaagatcgtcaactacacagtggtatacagggac
ataaatagccagcaggacctggttaacatgaccaaggacacgagtatcactttgacaaat
ttgaaacctgataccacttacaacatcaaagtgagggcccgcaccagtaaaggggctggg
ccactcagccccagcatccagtcccggaccatgcctgtagagcaagtgtttgctaagaac
ttccgtgtcaatgccgtcatgaaaacgtctgtgttgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcgatgaagaaactcataagtgacctccagccagacacggactattcttttgtgcta
atgaaccgtgggagcagtgcaggagggctccagcacctcgtctcaatccgcactgctcct
gatgtcttgcaaagcaaacccatcgccacaaacaaatacatacaggaaggaaaattcact
ctcactcttcccaaagtgcagaccactgtgccagttcggtggtactacatcgtggttgtg
ccagcagaccagagcaccagaaccctgactgctcggtggcggacacctgatgagatggag
ctggaccagctgctggaggccataagccaagggagtcagagcaggcggcagcgacgccag
gcagacagactcaagccctacattgctgctcaagtggatgtgctgcctgagaccttcacc
ctgggggatgagaagaactacaaaggtttctacaacaagcctctgtctcaagacctgagc
tatcgctgctttgtgctggcctcactggaggatggggacacgaagagatatgcagccagc
ccctactcagatgagatcgtgatggaagtggcttcagcaaagcagcaggatgaaccagag
atgctgtgggtgatgggacccgtcctggctgtgatattaatcatcatcattgtcattgcc
atacttctcttcaaaagtaagcaagaaaggaaaagggcacattccccctcttccaaggat
gaacactccattggcctgaaggactcactcttggcccactcgtctgacccagttgagatg
aggcggctcaactaccagactccaggtgccagtgtcccctgttgcccgaatatctcaagc
atgcgtgaccacccccccatccctgtgagcgacctctccgacaacatcgaccggctcaag
gccaacgatgggctgaagttctcccaggagtatgagtccattgatcccgggcagcagttc
acctgggagaactccaacctggaagtgaataaacccaaaaaccgctatgcaaatgtgata
gcctatgaccactcgcgtgtcatcctgacttccatcgatggggtccccggcagtgattac
atcaatgccaattacattgatgggtaccggaagcagaacgcctacattgccacgcaggga
ccgctgccagaaaccctcagtgacttctggaggatggtgtgggaacagagaacagcaacc
atagtcatgatgaccaggctggaggagaagtccagggtaaagtgtgaccagtactggccg
agccggggtacggaaacctatgggatgatccaggtgaccctgctggatacagtcgagctg
gcgacctacaccgtccgcacctttgcgctgtacaagaatggctccagtgagaagacagag
ctgcgacagttccagttcatggcttggcccgatcatggggtcccagaataccccacccca
atcctcgctttcctgcgacgggtcaaggcctgtaacccaacagatgctgggcccatggtt
gtgcattgcagtgccggcgtgggccgaactggctgcttcattgtcatcgatgccatgctg
gagcggatgaagcatgagaagactgtggacatctatggccacgtgacgtgcatgcgctct
cagcgcaactacatggtgcagacagaggaccagtacatcttcatccacgaggccttgctg
gaggctgccacgtgtggcaatactgaggtgcctgcacgcaacctcttcgcccacatccag
aagctgacccaggtgccaccgggggagagcgttactgcaatggagctggaattcaagctg
ctggccaactctaaagcacatacctcacgtttcatcagtgccaacctcccgtgcaacaaa
ttcaagaaccgccttgtgaacattatgccgtatgagctgacgagagtctgcctgcagccc
atccggggtgtcgagggctctgactacatcaatgccagcttcatagatggctacaggcag
cagaaggcctacatcgccacgcagggaccactggccgagaccactgaggatttctggcgg
atgctctgggagcacaactccaccattgtggtgatgttgacaaagctgcgcgagatgggc
cgggagaagtgccaccagtactggcctgcagagcgctctgcccggtaccagtactttgtg
gtggaccccatggcagagtacaacatgccacagtacatcctccgggagttcaaggtgacg
gatgccagggacggccagtcacggaccatccgccagttccagttcacagactggcctgag
cagggagtgccaaagacaggagagggtttcattgacttcattgggcaggtgcacaagacc
aaggagcagtttgggcaggatgggcccatcacggtgcactgcagtgctggggttgggcgc
acaggcgtgttcatcacactcagcatcgtgctggagaggatgcgctacgagggcgtggtg
gacatgttccagatggtgaagaccttgcggacgcagcggccggccatggtgcagacagag
gaccagtaccagctgtgctacagagccgcactggagtaccttggcagctttgaccactat
gcaacgtaa
DBGET
integrated database retrieval system
