Corvus brachyrhynchos (American crow): 103624649
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Entry
103624649 CDS
T08418
Symbol
SLIT1
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1 protein
KO
K06838
slit 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cbrc00536
]
103624649 (SLIT1)
Glycosaminoglycan binding proteins [BR:
cbrc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103624649 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
LRRNT
LRRCT
LRR_9
LRR_1
LRR_14
Laminin_G_2
hEGF
EGF_TEN
Laminin_G_1
LRR_EndoS
EGF_4
EGF_Teneurin
LRRCT_2
EGF_CA
EGF_DL_JAG
EGF_2
EGF_STAB1-2
FNIP
Motif
Other DBs
NCBI-GeneID:
103624649
NCBI-ProteinID:
XP_017581599
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MLISSSSLCRELNGNNITRINKNDFAGLKQLRVLQLMENQISMVERGAFDDMKELERLRL
NRNQLHTLPELLFQNNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGA
FRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTI
GLFTQCAAPAQLRGLNVAEIQKNEFSCSGQTDPAHAQLCSLSSGSCPAMCTCSNGIVDCR
GKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGL
RSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNK
IQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRANPVETSGARCASPRRLANKR
IGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPPKCRCESGVVECSNLKLTKIPD
RIPQSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGASSVNELHL
TVNQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGA
FDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPD
FRCEEGKEETSCIPRPQCPQECTCLDTVVRCSNKHLKALPKGIPKNVTELYLDGNQFTQV
PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRL
LSLHGNDISSLPEGIFADVTSLSHLAIGANPLYCSCNLRWLSSWVKTGYKEPGIARCAGP
PDMEGKLLLTTPAKKFECQGPPALSVQAKCNPCLSSPCQNQGTCHNDPLGSYRCACPSGY
KGRDCEVALSGWASXXXXNGGTCQPQEGEGAGFRCLCPVGFEGPSCHTTSDPCKEHSCEN
GGSCVPSATNYTCLCPAHYTGEFCEQPPNFCSAELNPCQHDSTCISTSQGPRCECAPGYV
GSNCSEDFDDCQDHRCQNNARCLDEVNGYSCLCTEGYSGQLCEMPPHTAGHPGLCERAEC
QNGAPCVERGARALCQCLPGFGGPKCEKLLSVNFVDRDTYLQFTDLQDWPRANITLQVST
AEGNGILLYNGDSDHMAVELYQGHVRVSYDPGTHPSSAIYSAETINDGQFHTVELVTFDQ
MVNLSIDGGSPMTMQLGQALHAEQXGSPLRGSSALPCHXHXDVPGCSVLVVPCQSHTCAV
PXWLYCTRWCCTSPSAVLVLSHAVLSAGGLCVLVPRQQVLTAPCAHRCVHGLCLPLDALS
YSCQCHEGYQGALCNQPAEPPDPCRHQPCVHGHCHLTPGGQPTCECHDGYTGALCDQEPE
CRGEPVRDYHQVQRGYTICQTTRPVAWVECRGTCGGPDASCCTGLRLRRRKYAFECSNGA
TFVEEVEKPSKCGCSQCL
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgctaatttcttcctcttctctctgcagggagctcaacggcaacaacataacgcgaatc
aacaagaatgactttgctgggctgaagcagctccgtgtcctgcagctgatggaaaaccag
atcagcatggtggagcgtggggcattcgatgacatgaaggagcttgagcggctacggctg
aaccgcaaccagctgcacaccctgcccgagcttctcttccagaacaaccaggcgctgtcg
cggctggacctgagtgagaacttcatccaggccatccccaggaaagcattccgtggggct
accgacctcaagaacctccaactggacaagaaccagatcagctgcattgaagatggggct
ttccgtgccctgcgggggctggaggtcttgaccctgaataacaacaatatcacttcaatc
cctgtgtccagcttcaaccacatgcccaagctgcgaacgttccgcctgcattccaaccat
ctcttctgcgactgccacctggcctggctctcgcagtggctgcgccagcgccccaccatc
gggctcttcacccagtgcgctgctcctgcccagcttcgtggcctcaacgtggctgagatc
caaaagaacgagttcagctgctctggacaaacggacccagcacatgcccagctctgcagc
ttgtcctctggctcctgcccagccatgtgcacttgcagcaatggcattgtggactgtcgg
ggcaaggggctcacggccatccccgccaacctgcccgagaccatgacagagatacgtctg
gaactcaacggcatcaagtccatccccccaggagccttctcaccctacaagaagctgcgg
aggatagacctgagcaacaaccagatctcggagatcgcccctgatgccttccaggggctg
cgctctctgaactccctggtgctgtatggcaacaagatcacggacctccccaagggtgtc
tttggaggactttttgcgctgcagctgctgcttctcaatgccaacaagatcaactgtgtg
cgggcagatgccttccaggacctgcagaacctctcgctgctctcactctatgacaacaag
atccagagcctggccaaaggcacgttcacctccctgcgggccatccagactctgcacctg
gcccagaaccctttcatctgtgactgcaacctgaagtggctggcagatttcctccgtgcc
aaccctgtggagaccagcggagcccgctgtgccagcccccggcgcttggccaacaagcgc
atcggccagatcaagagcaagaagttccgctgctcggccaaagagcagtacttcatccca
gggacagaggattaccagctgaacagtgaatgcaacagtgacgtgatttgccccccaaaa
tgccgctgtgaatccggtgtggtcgagtgctccaacctgaaactcaccaagatcccagat
cgcatcccacagtccacagctgagctacgcctgaacaacaatgaaatctccatcctggag
gccactggcattttcaagaaactcacacatctgaagaaaatcaacctcagcaacaacaag
gtgtcagaaattgaggatggggcattcgagggggcatcctctgtcaacgagctgcacctc
actgtcaaccagctggagtctgtgcggagcggcatgttcaggggcctggacgggctgagg
acactaatgctgaggaacaaccgcatcagctgcatccacaacgacagcttcacagggctg
cgcaacgtgcgcctgctctccctgtacgacaaccagatcagcacaattgcaccgggtgcc
tttgacacgctgcagtccctctccacactgaacctgctcgccaaccccttcaactgcaac
tgccagctggcctggctgggggactggctgcgcaagaggaagatcgtgacagggaaccct
cggtgccaaaaccccgacttcctccggcagatcccactccaggatgtggctttccccgac
ttcaggtgtgaggaaggtaaggaggagaccagctgcatcccccggccccagtgcccacag
gaatgcacctgcctcgacactgttgtccgctgcagcaacaagcacctcaaggccctgccc
aaggggatccccaagaatgtcacagagctctacctggatggaaaccagttcactcaggtc
ccggggcaactctctaccttcaagtatctgcagcttgtcgatctgagcaacaacaagatc
agctccctgagcaactcctccttcaccaacatgagccagctcaccaccctgatcctcagc
tacaactccctgcagtgcatccctccgctggccttcgagggcctccgctccctgcggctg
ctgtctctccatggcaatgacatttccagcctccctgagggcatcttcgcagatgtcacc
tccctttcccacctagccattggggccaaccccctgtactgcagctgcaacctgcgctgg
ctctccagctgggtcaagacgggctacaaggagccaggcattgcccgctgcgctgggccc
cccgacatggaaggaaagctgctgctcaccacccctgccaagaaatttgagtgccaaggc
ccacccgccctgagcgtccaggccaagtgcaatccctgcctctccagcccctgccagaac
cagggcacctgccacaatgacccccttggctcctaccgctgcgcctgtcccagtggctac
aagggcagggactgcgaggtggcactcagtggctgggcctcnnnnnnnnnnnnnaacggg
ggaacctgccagcctcaggagggggaaggagctgggttcaggtgcctgtgcccagtgggc
ttcgagggcccaagctgccacaccaccagcgacccctgcaaggagcacagctgcgagaat
gggggctcctgtgtgcccagtgccaccaactacacctgcctttgtcctgcccactacaca
ggggaattctgtgaacagcctcccaatttctgctcagccgagctcaacccctgccagcat
gactccacctgcatctccaccagccaggggcccaggtgtgagtgtgcacccggctacgtg
gggagcaactgcagtgaggacttcgatgactgccaggaccaccggtgccagaacaacgcc
cgctgcctggatgaggtgaacggctactcctgcctctgcaccgagggctacagtggccag
ctctgtgagatgccaccccacaccgctggccaccctggcctctgtgagcgagccgagtgc
cagaacggggccccatgtgtggagcggggtgcccgcgccctttgccagtgcctgcctggt
ttcggcggccccaaatgtgagaagctgctgagcgtcaacttcgtggaccgtgacacgtac
ctgcagttcactgaccttcaagactggccccgggccaatatcacccttcaggtctccacg
gctgaaggcaatggcatcctgctgtacaacggtgacagtgaccacatggctgtggagctg
taccagggccatgtgagggtgagctatgaccctggcacccaccccagctcggccatctac
agtgctgagaccatcaacgatgggcagttccataccgtggagctggtgacctttgaccag
atggtgaacctgtccattgatggtggcagccccatgaccatgcaactcgggcaagcacta
cacgctgaacagtgaggctcccctctacgtgggagcagtgccctgccatgccactagcac
tgagatgtgccaggctgttctgtgctggtggtgccatgccagagccacacctgtgctgtg
ccatgatggctgtactgtaccaggtggtgctgtaccagtcccagtgcagtactggtgctg
agccatgccgtgctcagtgctggtgggctgtgcgtgctggtgccacgccagcaggtcctg
acagcaccgtgtgcccacaggtgtgtgcacgggctgtgcctgcccctcgacgccctctcc
tacagctgccagtgccacgagggctaccagggtgcgctctgcaaccagcctgccgaacca
cccgacccctgccgccaccagccctgtgtccatggccactgccatctcaccccaggtggc
cagcccacctgcgagtgccacgatggctacactggagccctctgtgaccaagagccagag
tgccgcggggagccagtgcgggactaccaccaggtgcagcggggctacaccatctgccag
acgacgcggccggtggcctgggtggaatgccgggggacctgcggtggccctgacgccagc
tgctgcactgggctgcggctccggcgcaggaaatacgccttcgagtgcagcaacggtgcg
acctttgtggaggaggtggagaagcccagcaagtgcggctgcagccagtgtctgtga
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integrated database retrieval system
