Culicoides brevitarsis: 134831239
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Entry
134831239 CDS
T10947
Name
(RefSeq) fringe glycosyltransferase
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri00514
Other types of O-glycan biosynthesis
cbri04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
134831239
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134831239
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cbri01003
]
134831239
Enzymes [BR:
cbri01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
134831239
Glycosyltransferases [BR:
cbri01003
]
Glycan extension
O-Glycan
134831239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
134831239
NCBI-ProteinID:
XP_063700985
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All DBs
Position
2:complement(42540879..42571678)
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AA seq
404 aa
AA seq
DB search
MLCFRKPIMTISHILISSKYRKILQTMAFASFIIYITLVLYNNVYGLPSASILNQQVNTT
HDREPTDIIPTLADYFDINLPPDDLQRLHEMTRETKVNFATKPSIGSDMQLLDYYNSNTV
TGTPKPDQYSLDDIFISVKTTKNYHNNRLVMIIKTWFQLAKDQTWFFTDTEDKYYQKLTN
NHMINTNCSQGHFRKALCCKMGKEFDFFMSSGKKWWCHFDDDNYVNVPRLVSMLSEYSAS
QEWYLGKPSISSPLEIFLDNNKFSLTPSETNKKIKFLFATGGAGFCISRKLGKKMMPVAG
NGNFVKIGDKIRFPDDVTMGFIIESILKRPLTVVDAFHSHLEPMEFIRPETFQDQVSFSY
AKMKNDWNVVKLDGGFDTKTDPKRFFSLHCHLFPNTSFCPQRKR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtttcagaaaacctattatgacaatttcccatatcctcatttcatcaaaatat
cgaaaaatattacaaacaatggcattcgcttcattcatcatctatatcacgcttgttttg
tacaacaacgtctatggcttaccgtcggcatcgatcctgaatcaacaggtcaatacaaca
cacgatcgagagccaacagacattattccaacgttagctgattatttcgatattaatttg
ccgccagatgatcttcaaagattgcatgaaatgacacgtgagacaaaagttaactttgca
acaaagccttcgatcggcagtgatatgcaattattagattattataactcaaatacagtg
actggcacaccaaaaccagatcaatatagtttagacgatatatttattagtgttaaaaca
acaaaaaattatcataacaatcggttagttatgataattaagacgtggtttcaattagca
aaggatcagacgtggttcttcacggatactgaagacaaatattaccaaaaattaacaaat
aaccacatgatcaatacaaattgctctcaaggtcattttaggaaagcactctgttgcaaa
atgggaaaagaattcgactttttcatgtcaagcggaaaaaaatggtggtgtcattttgat
gacgataactatgtaaatgtgccaagattagttagtatgttaagtgaatacagtgcgtca
caagaatggtatttgggcaaaccaagtatatcttcgccgttagaaatatttttagataat
aacaaattttcgctgacaccatcagaaaccaataaaaaaattaaatttttgtttgcaact
ggaggagcaggattctgtataagtcgaaagttgggcaaaaagatgatgcctgtagctggc
aatggaaatttcgttaaaattggcgataaaattcggtttcctgacgacgttacaatgggt
ttcatcattgaaagtatacttaaacgacccttgacagttgttgatgcattccattcgcat
ttagagcccatggaatttattcgaccagaaacttttcaagatcaggtctcctttagttat
gcaaagatgaaaaacgattggaatgtcgtcaaactcgacggaggattcgacacaaaaaca
gacccaaagcgattcttttcactccattgtcatctctttccgaacacaagtttctgtcct
caacgtaaacggtga
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