Chlamydia buteonis: HBN95_02470
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Entry
HBN95_02470 CDS
T07542
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cbue
Chlamydia buteonis
Pathway
cbue03030
DNA replication
cbue03410
Base excision repair
cbue03420
Nucleotide excision repair
cbue03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBN95_02470 (ligA)
03410 Base excision repair
HBN95_02470 (ligA)
03420 Nucleotide excision repair
HBN95_02470 (ligA)
03430 Mismatch repair
HBN95_02470 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbue03032
]
HBN95_02470 (ligA)
03400 DNA repair and recombination proteins [BR:
cbue03400
]
HBN95_02470 (ligA)
Enzymes [BR:
cbue01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
HBN95_02470 (ligA)
DNA replication proteins [BR:
cbue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HBN95_02470 (ligA)
DNA repair and recombination proteins [BR:
cbue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
HBN95_02470 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBN95_02470 (ligA)
MMR (mismatch excision repair)
DNA ligase
HBN95_02470 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HBN95_02470 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
HHH_3
Nlig-Ia
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
QXE27501
LinkDB
All DBs
Position
562772..564754
Genome browser
AA seq
660 aa
AA seq
DB search
MQSTYSREQYISLCKDIEEDDYRYYVLHNPTISDYDYDMKMRQLLSIEAQHPEWKVLWSP
SMRLGDRTSGSFLVVAHAHPMLSIANAYTLEELYEFFFRIEKALGYTPKYTVEIKIDGIA
VSIRYEQRVLVQALSRGNGRKGEDITANIRTIRTLPLRLSKEAPEFLEVRGEVFFSRATF
CQINAAQRQAEKPEFANPRNAAGGTLKLLSAKEAAQRNLEISIYGSLAEENKRSHYENLL
LCREWGFPVFGQPRQCQTIDEVAASLHEIEALRDQLPMEMDGVVIKVDDIEDQKVLGMTA
KHYRWALAYKYAPERAETILEDILVQVGRTGVLTPVAKLRPVVLSGSRVSRASLYNEDEI
ERKDIRIGDTVYVEKGGEIIPQVVGVCLEKRPEGSRPWVMPEYCPVCHRKVTRESDKVSV
RCTNSLCSAGVIEKIRFFCGRDALDIDHLGEKVITKLFDLGCIHRRCDIFQITEEDLRQV
PGFKDKSIRNVLKSIEKAKSVPLDRFITALGIPYVGIGGANALAQHFLSLASVMAASLDD
LKVVEGIGDKVAESIVAYFNQPEHLEEIQKMLSLGVHVLPCHRESSSCLGKTFVITGSLE
KLTRSEAETYIRNCGGKVGSSVSKNTDYLVVGQDPGSKLKKAQELEIPILSEDELLKILH
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtacatattccagagaacaatatatctctctgtgtaaagatatcgaagaagat
gattatcgctattatgttcttcataatcccacaatctcagattatgactatgatatgaaa
atgcggcagcttctttctatagaagctcagcatcctgaatggaaggtattatggtctcca
tctatgcgtcttggggatcgaacttcagggagcttccttgttgtagctcatgcgcacccc
atgctttctattgctaatgcctatactttagaagagctttacgagttcttttttcgtata
gagaaagcgttggggtatactccaaaatacactgtagaaataaaaatagatggtattgcc
gtatctattcgttatgagcagagagtccttgtacaggctttaagccgtgggaatggacgt
aagggagaggatatcacagcaaatattcgtacgatacgcacgcttcctctacgtttatca
aaagaggctccagaattccttgaggttcggggtgaggtatttttttcacgagctactttt
tgccagataaatgctgcacaaaggcaagctgagaaacctgaatttgctaatccaagaaat
gctgctggtggcactttgaaattgttatctgctaaggaagcagcacaaagaaacttagaa
atttctatttatggatcgttagcagaagagaataagcgatcgcattatgagaatctcttg
ttgtgtagggagtggggattccctgtattcggtcagccacgtcagtgccaaactatagat
gaagtagcagcctctctccatgagatagaagcgttgcgagatcaacttcccatggaaatg
gatggtgtggtgatcaaagtagatgatatagaagatcaaaaagtcttaggaatgacagcg
aagcattatcgctgggcactagcgtacaagtatgcgccagaacgagctgaaactatttta
gaagatatcttagttcaagtgggcagaacgggggtattgacccccgtggctaagctgcga
cctgtcgttttgtcaggatcaagggtttctagggcttctctatacaatgaagatgaaatt
gagagaaaagacatccgtataggtgacactgtatatgtagagaaaggcggagaaattatt
cctcaagttgttggtgtttgcctagaaaagcgtccggaaggctcacggccctgggttatg
cccgaatactgtcctgtttgtcatcggaaggtaactcgcgaatctgataaagtgtctgtc
cgttgtacgaactccctgtgttctgcaggagttattgaaaaaatccgctttttttgtgga
agagatgctttagatattgatcatcttggtgaaaaggttattacgaagttatttgattta
ggttgtattcatcgacgctgtgatatttttcaaattactgaagaagatctccgccaggtt
ccaggatttaaagataagtccataagaaacgtgcttaaaagtatagagaaagctaaaagt
gttcctttagatcgttttattactgctcttggtattccttatgtgggtataggcggagcc
aacgctcttgcacaacattttctttctttagcgtctgtaatggctgcctctttggatgat
ctgaaagttgtagagggaatcggagataaagttgcagagtctatagttgcttattttaat
caaccagaacatctcgaagagattcaaaaaatgctttctctaggggtgcatgttttgcct
tgccatagggaaagttcttcttgtttagggaaaaccttcgtaattacgggaagccttgaa
aaattgactagatccgaagcggaaacttacattcgcaattgtggaggtaaggtgggttct
tccgtttctaaaaacaccgactatcttgttgtaggccaggatccaggatccaagttaaaa
aaggcccaagaacttgaaattcccattcttagcgaggatgagttgttaaaaattcttcac
tga
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