Chryseobacterium camelliae: PFY12_06270
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Entry
PFY12_06270 CDS
T08762
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ccab
Chryseobacterium camelliae
Pathway
ccab01501
beta-Lactam resistance
ccab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFY12_06270
01503 Cationic antimicrobial peptide (CAMP) resistance
PFY12_06270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccab02000
]
PFY12_06270
01504 Antimicrobial resistance genes [BR:
ccab01504
]
PFY12_06270
Transporters [BR:
ccab02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PFY12_06270
Antimicrobial resistance genes [BR:
ccab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PFY12_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
S1FA
DUF7318
Motif
Other DBs
NCBI-ProteinID:
WBV61724
UniProt:
A0ABY7QRA6
LinkDB
All DBs
Position
1354753..1357935
Genome browser
AA seq
1060 aa
AA seq
DB search
MLKQFIERPVLSTVISIILLLLGALSLFNLPIALFPDIAPPSVQVTAFYPGANAEVVARS
VATPIEEAVNGVENMTYMTSNSSNDGTMTLSVFFKQGSDADNAAVNVQNRVSKAMSQLPQ
EVVQAGISTQKVQNSMIMFMGLSSNDPKQYDELFLQNYLKINVIPQIQRIPGVAQAQVFG
TRDYSMRLWLKPDRLAANGLSPQEVLNAVKDHNLEAAPGRLGQGSKETYEYILKYKGKLN
KNEDYENIAIKANSDGSFLRLKDVARVEFGSYTYTAANRVDGKPVAGFAILQTAGSNANE
ILTEIEKQVDQMKTTLPKGVEPIIMYNSKDFLDASIHQVVETLVIAFILVFIVVYIFLQD
FRSTLIPAIAVPVAIIGTFFFLQLFGFSINMLTLFALVLAIGIVVDDAIVVVEAVHSKME
RTGMPVEHATMSSMSEISGAIISITLVMCAVFIPVGFMQGPAGVFYRQFAFTLAIAILIS
AINALTLSPALCAMFLNDPQGEHGEHGKKTGFGARFFNAFNASFDNMTRKYIYSLKFLIK
NKWVAIGGLAVLIAGSVFLIKKAPSGFIPTEDQGFVLYAVNTPPGSSLDRTHRATAQIDQ
IINGEKAKNHLWVADGMNFISNANASPYSAGFIKLKDYDQRGEVKDPDQIAATLTGKVSQ
VKDANAFFFNFPTVQGFGNVSGFEFMLQDKTNGSFEQLGTTTQAFIGELMKRPEIAFAFT
TYAAGNPQYTIDVDSDKANQLGVSITELMQTMQIYYGSSFVSDFNRFGKYYRVMAQADIP
YRTDANSLEGIYVKNKSGEMVPVKTLVTLKRTFGPETVTRNNLFNAVTINGTPKPGYSTG
DAIKAVEETAQKSLPRGFGYEWTGITREEIKTSGQTTFIFALSILFVYFLLAAQYESYIL
PFAVILTIPTGIFGVFAFTGLAGIDNNIYVQVGLIMLVGLLAKNAILIVEFAVQRRNAGR
TLLESALQASRLRLRPILMTSFAFIVGMLPLVWSQGAAAKGNHSIGISTVGGMFTGVVFG
IFIIPVMFVIFQYLHEKMPSRKKKRLQRQKMEQELLSPAH
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaatttatagaaagaccggtcctttcaacggtcatctccataatactttta
ttattgggggctttgtccctctttaatttacccattgcgctctttccggatattgcgccg
ccaagtgttcaggtaacggctttttatccgggagcaaatgcagaagtggtggctcgttcg
gtagcaacaccgattgaagaagccgtgaacggagttgagaatatgacttatatgacatct
aattccagtaacgacggaacgatgacgttaagcgtatttttcaagcagggctcagatgca
gataatgctgcagtgaatgttcagaaccgtgtatccaaagcaatgagccagcttccacag
gaggttgtgcaggcaggaatttcaacgcagaaagttcagaacagtatgattatgtttatg
ggattgtcaagtaatgatccgaaacaatatgatgagcttttcttacagaattatttgaaa
attaatgtcattcctcaaattcagcgtattccgggtgttgctcaggcacaggttttcgga
acaagagattattcaatgcgactttggctaaaacctgacagattagctgctaacggactt
tcacctcaggaagttttgaatgcggtaaaagatcataatcttgaagcagctccaggtcgt
ttgggacaaggaagtaaggagacttacgaatatattttaaagtataaaggtaaattaaac
aaaaacgaagactacgaaaatatagccattaaagccaatagcgacggttctttcctaagg
ctgaaagacgtggcaagagtagaattcggatcctatacttacaccgcagccaacagagtt
gacggaaaaccggttgccggatttgccatccttcagactgctggatcaaatgcgaacgag
atcttaacagaaattgaaaaacaggttgaccagatgaaaactacacttccaaaaggagtg
gaaccgatcatcatgtacaattctaaggatttcctggatgcatctattcatcaggttgtt
gaaacattagtcattgcatttatactggtatttattgtagtctacattttccttcaggat
ttcagatctacattaattcctgcgattgccgttccggttgccattatcggtaccttcttc
ttccttcagctgtttggattcagtatcaatatgcttacattgttcgcattggtactcgcc
atcggtattgttgtggatgatgcgattgtagtcgttgaagcggtccattctaaaatggaa
cgtacaggaatgccggttgagcatgcgacgatgagctcaatgagtgaaatttccggtgcc
attatttccattaccttggtgatgtgtgctgtatttattcccgttggtttcatgcagggg
ccagcaggagttttctacagacaatttgcctttacactggcgattgcaattttaatttcg
gcgattaatgcgttaacattaagccctgcattatgtgcaatgttcctgaatgatcctcag
ggagaacacggtgaacatggtaaaaaaacaggttttggagcaagatttttcaatgctttc
aatgccagctttgataacatgacgagaaaatacatctatagtcttaaatttttaattaaa
aacaaatgggttgctatcggaggtttagccgttctgattgcaggaagtgttttcttaatt
aaaaaagcaccgtcaggatttattccaacagaagatcaaggtttcgtactgtatgccgtg
aatactcctccgggaagttcactggacagaacacacagagcaactgcacaaattgatcaa
ataattaatggtgaaaaagctaaaaaccacctttgggtagccgacggaatgaacttcatc
agtaatgccaatgcttctccttattctgcaggttttattaaattaaaggattatgaccag
cgcggtgaagtaaaagatcctgatcagattgccgctaccttaacgggaaaagtatcacag
gtaaaagatgccaatgcattcttcttcaacttccctactgttcagggatttggtaacgtt
tccggttttgaatttatgcttcaggataaaaccaacggttctttcgaacaattaggaacg
acaactcaggcatttatcggagaattgatgaaacgcccggaaatcgcatttgcttttaca
acgtatgcagccggaaatccacaatatacgatcgatgtagattcagacaaagcgaatcag
ctgggagtttcgattacagaactaatgcagaccatgcagatttattacggaagtagcttc
gtttctgatttcaacagattcggaaagtactacagagtaatggctcaggcagatattcct
tatcgtacggatgcaaattctctggaaggaatttatgttaaaaataaatcaggagaaatg
gttcctgtaaaaacattagtgactttaaaaagaaccttcggacctgaaaccgtaacaaga
aacaacttgttcaatgcggttaccatcaacggaactccaaaacccggttacagtaccgga
gacgcgattaaagcagtggaagaaactgcccaaaaatctcttccaagaggtttcggatat
gaatggaccggaattacccgtgaagaaatcaagacaagcggacaaactacttttatcttc
gcattaagtatccttttcgtttatttcttactggcagctcaatatgaaagttatatcctt
ccgtttgccgtgatcctgacgattccaacaggtattttcggagtatttgccttcaccggg
ttagcaggaattgataataacatttacgttcaggtcggattgatcatgctcgtcggtcta
ttggccaagaatgccattctgattgtggaatttgccgttcagagaagaaatgcaggaaga
actttactcgagtctgcacttcaggcttcaagattgcgtttaagacctatcttaatgacc
tcatttgcctttattgtaggtatgctgccattggtttggtcacaaggtgcggctgcaaaa
gggaatcattctatcgggatcagtacagttggaggaatgttcacaggagtggtattcggg
attttcattattcccgtcatgtttgtgattttccaatatttacatgaaaaaatgccgagc
agaaaaaagaaaagacttcaaagacaaaaaatggagcaagaacttttaagtccggctcat
taa
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