Cutaneotrichosporon cavernicola: CcaHIS019_0210470
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Entry
CcaHIS019_0210470 CDS
T09540
Symbol
smb1, CcaverHIS019_0210470
Name
(RefSeq) uncharacterized protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0210470 (smb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0210470 (smb1)
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0210470 (smb1)
03032 DNA replication proteins [BR:
ccac03032
]
CcaHIS019_0210470 (smb1)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CcaHIS019_0210470 (smb1)
Spliceosome [BR:
ccac03041
]
Complex A
U1 snRNP components
Sm proteins
CcaHIS019_0210470 (smb1)
U2 snRNP components
CcaHIS019_0210470 (smb1)
Complex B
U1 snRNP components
CcaHIS019_0210470 (smb1)
U4/U6.U5 tri-snRNP components
CcaHIS019_0210470 (smb1)
Complex C
U2 snRNP components
CcaHIS019_0210470 (smb1)
DNA replication proteins [BR:
ccac03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CcaHIS019_0210470 (smb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
85493556
NCBI-ProteinID:
XP_060454951
UniProt:
A0AA48I9Q5
LinkDB
All DBs
Position
2:join(2703524..2703526,2703789..2703947,2704149..2704477,2704643..2704693,2704735..2704759)
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AA seq
188 aa
AA seq
DB search
MPPPKAKHSKMVTLLHYRLKVTLNDGRQLVGQMLAYDKHMNFVLAECEEFRTVKGKKTKD
TPAGEPTPTVQQKRTLGLVILRGETIVSVSVEGPPPATSEGPGIAAGPGRGVPAGRGMPL
GGGAGAPAMAARPMPYARPPPGFPPGMAPPPGMPPGFPQGMPPGMPPGFRPPGGPPGFPP
GFPPRPPA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccccaaggccaagcactcgaagatggtgacgctgttgcactaccgtctcaag
gtgacgctcaacgacggccgccagctcgtgggtcagatgctcgcatacgacaagcacatg
aactttgtgctggccgagtgcgaggagtttagaacggtcaagggcaagaagaccaaggac
acgccggccggcgagccaaccccaacggtgcagcagaagcgcacgcttggcctcgtcatc
ctgcgcggcgagacgatcgtgagcgtgtccgtcgagggcccgcctcccgccacatcggag
ggaccaggcatcgctgctggcccaggtcgcggcgtacctgccggccgtgggatgccgctc
ggcggcggggctggcgccccggccatggcagcgcgtcctatgccttacgcgcgcccacca
ccgggcttccctccggggatggcgccgccgccagggatgccacctgggttcccccaggga
atgcctcctggaatgccgcctggattccgtccgcccgggggacctcccggcttccctcct
ggatttccgccccgtccccccgcatag
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integrated database retrieval system
