Cutaneotrichosporon cavernicola: CcaHIS019_0211290
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Entry
CcaHIS019_0211290 CDS
T09540
Symbol
CAF16, CcaverHIS019_0211290
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CcaHIS019_0211290 (CAF16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0211290 (CAF16)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CcaHIS019_0211290 (CAF16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_25
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_16
nSTAND3
AAA_23
PduV-EutP
AAA_28
AAA_22
SRP54
AAA_33
MMR_HSR1
AAA_15
CLP1_P
ORC-CDC6-like
AAA_27
AAA
TsaE
VapE-like_dom
NACHT
Motif
Other DBs
NCBI-GeneID:
85493638
NCBI-ProteinID:
XP_060455033
UniProt:
A0AA48L1Y9
LinkDB
All DBs
Position
2:join(2945316..2945466,2945501..2945601,2945636..2945963,2945998..2946203,2946244..2946291)
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AA seq
277 aa
AA seq
DB search
MTSNGCPDELAIDCRDLTFHFNPNDTEPVLSGLNIQLARGDCCLLVGANGAGKSTLLRIL
AGKRLTKTRNCRILGQDVFMNTPGGVVYLGTEWCMNPVVRSDIVVSHFLDSVGGWRHRAR
RDRLLEILDVDLDWRMHQISDGERRRVQLCMGLMTEWDVLLLDEVTVDLDVLVRADLITF
LASEAKERGATILYATHIFDGLGSFPNKIVHIQLGSTPRPTLEWSPGSGDLFSVALGWLR
EDRELRRKKEAARGRIRGPKGDTRDARTFFDKYDYAH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaaacggttgcccggacgaactcgcgatcgactgtcgcgaccttaccttccac
tttaacccgaacgacacggagcccgtcctatccggccttaacatacagcttgcccgtggg
gactgctgcctcctcgtcggtgccaatggagccggcaagtcgacgctcctccgcatccta
gctggcaagcgcttgaccaagacgcgcaactgccgcatcctcggccaggatgtcttcatg
aacacccctggtggcgtcgtatacctcggtaccgagtggtgcatgaaccccgtcgtgcgc
tcggacattgtggtgtcccacttcctcgacagcgttggcgggtggcggcaccgcgcacgc
cgtgatcgcctcctcgagatccttgacgtagacctcgactggcgcatgcaccagatctcg
gacggtgagcgccgccgcgtccagctctgtatgggcctcatgaccgagtgggatgttctc
ctactcgacgaggtgacggttgacctggatgtgctcgtgcgcgcagatctcatcaccttc
ctcgcttccgaggcaaaggagcgcggcgccacgattctctacgccacgcacatcttcgat
ggcctcggctctttcccgaacaagatcgtgcatattcagcttggatcgacacctcggccc
acgcttgagtggagcccgggtagcggcgaccttttctctgttgcacttggttggctgcgc
gaggaccgtgagctgcgccgcaagaaggaggccgcgcgaggcagaatccgtggacctaag
ggcgatacccgcgatgcccggacgttcttcgacaagtacgactacgctcactag
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