KEGG   Cervus canadensis (wapiti): 122423286
Entry
122423286         CDS       T07554                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad01524  Platinum drug resistance
ccad04115  p53 signaling pathway
ccad04210  Apoptosis
ccad04215  Apoptosis - multiple species
ccad05010  Alzheimer disease
ccad05012  Parkinson disease
ccad05014  Amyotrophic lateral sclerosis
ccad05016  Huntington disease
ccad05020  Prion disease
ccad05022  Pathways of neurodegeneration - multiple diseases
ccad05134  Legionellosis
ccad05152  Tuberculosis
ccad05160  Hepatitis C
ccad05161  Hepatitis B
ccad05162  Measles
ccad05164  Influenza A
ccad05168  Herpes simplex virus 1 infection
ccad05169  Epstein-Barr virus infection
ccad05200  Pathways in cancer
ccad05222  Small cell lung cancer
ccad05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    122423286 (APAF1)
   04215 Apoptosis - multiple species
    122423286 (APAF1)
   04115 p53 signaling pathway
    122423286 (APAF1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122423286 (APAF1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    122423286 (APAF1)
  09172 Infectious disease: viral
   05161 Hepatitis B
    122423286 (APAF1)
   05160 Hepatitis C
    122423286 (APAF1)
   05164 Influenza A
    122423286 (APAF1)
   05162 Measles
    122423286 (APAF1)
   05168 Herpes simplex virus 1 infection
    122423286 (APAF1)
   05169 Epstein-Barr virus infection
    122423286 (APAF1)
  09171 Infectious disease: bacterial
   05134 Legionellosis
    122423286 (APAF1)
   05152 Tuberculosis
    122423286 (APAF1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    122423286 (APAF1)
   05012 Parkinson disease
    122423286 (APAF1)
   05014 Amyotrophic lateral sclerosis
    122423286 (APAF1)
   05016 Huntington disease
    122423286 (APAF1)
   05020 Prion disease
    122423286 (APAF1)
   05022 Pathways of neurodegeneration - multiple diseases
    122423286 (APAF1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    122423286 (APAF1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    122423286 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st NB-ARC WD40_CDC20-Fz APAF1_C Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd APAF-1-like_WHD Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 CARD WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 RMC1_N Beta-prop_HPS5 WD40_like Beta-prop_DCAF12 WD40_RFWD3 Ge1_WD40 Beta-prop_WDR11_2nd CARD_2 PEP5_VPS11_N Beta-prop_DCAF4 Utp8_b_propeller AAA_16 Beta-prop_SPT8 AAA_22 NPHP3_N ATPase_2 AAA_18 Hira nSTAND1 NACHT
Other DBs
NCBI-GeneID: 122423286
NCBI-ProteinID: XP_043296096
LinkDB
Position
21:46875899..46959912
AA seq 1249 aa
MDAKARNCLLQHREALERDIKTSYIMDHMISNGVLTVSEEEKVKNEPTQRQRAAMLIKMI
LKKDNYSYISFYNALLHEGYKDLAALLHGGIPVVSSSDGKDSVSGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAVQQKLSKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSFLEDCFPG
GVHWVSVGKQDKSGLLMKLQNLCARLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDIWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
MKKTDLPEQAHSIIQECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSIVQKDVKVPTKVLCILWDLETEEVEDILQEFVN
KSLLFCDRNGKSFLYYLHDLQVDFLTEKNRSQLQDLHKKMVTQFQRHHRLHSLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDGTD
CENFQEFLSLNGHLLGRQPFPNIVQLGLCELETSEVYRQAKLQAKQEVDNGMLYLEWVNK
KNMKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHDDEV
LCCAFSADDRFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGS
NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKS
INVKQFFLNSEEPQEDLEVIVKCCSWSADGARIMVAAKNKVFLFDIHTSGLLAEIHTGHH
STVQYCDFSPYNHLAVVALSQYCVELWSMDSRLKVADCRGHLSWVHCVMFSTDGSSFLTS
SDDQTIRLWETKKVCKNSATVLKQEMDVVFQENEVTVLAVDNIRRLQLINGNTGQIDYLT
EAQVSCCCLSPNLQYLAFGGEDGAIQILELLNNRIFQSRNGHKSTVRHIQFTADGKTLIS
SSDDSAVQIWNWQSEDPFFLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITRRLEKD
FVCHQDTVLSCDISSDATKFSSTSADKTAKIWRFELLSPLHELRGHKGCVRCSSFSVDSA
LLATGDDNGEIRIWNVSNGELLHLCAPISVEEGATTHGGWVTDLCFSPDTKMLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILKILE
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggatgcaaaagctcgaaattgtttgcttcaacatagagaagccttggaaagggacatc
aaaacatcctacatcatggatcacatgattagtaatggagttctaacagtgtcagaggag
gaaaaagtgaaaaatgagcccacccaacggcaacgagcagctatgctaattaaaatgata
cttaaaaaagataattattcttatatatcattctacaatgctctactccatgaaggttac
aaagatcttgctgcccttctgcacggtggcattcctgtcgtctcttcttctgatggcaaa
gattcagttagtggaataacttcatatgtaaggacagtcctgtgtgaaggtggagtacca
cagaggcccgttgtttttgttactaggaagaagctagtgaatgcagttcagcagaagctc
tctaagctgaatggtgaaccgggatgggtcaccatatatggaatggcaggttgtgggaag
tctgtattagctgcagaagctgttcgagatcattctttcctagaagattgtttcccaggg
ggtgtgcattgggtgtcagttgggaaacaggacaaatccgggcttctgatgaagctgcag
aacctttgcgcacggttggatcaggatgagagcttctcccagaggcttccacttaatatt
gaagaggctaaagaccgtctccgcattctgatgctgcgcaaacatccaaggtctttattg
atcttggatgatatttgggatccttgggtgttaaaagcttttgacaatcagtgtcaaatt
cttctcacaaccagagataagagtgttacagattcagtaatgggtcctaaatatgtagtg
cctgtggagagtggtttaggaaaagaaaaaggacttgaaatcttatccctttttgttaat
atgaagaaaacagatttgccagaacaagctcacagtattatacaagaatgtaaaggttcc
cctcttgtagtgtctttaattggtgcacttttacgagattttcccaaccgctgggagtac
tacctcaggcaacttcagaataagcaatttaagaggataagaaaatcttcatcttatgat
tatgaggctctagatgaagccatgtctataagtgttgaaatgctcagagaagatatcaaa
gattattacacagatctttccatcgttcagaaagatgttaaggtgcctacaaaggtgtta
tgtatcctctgggacttggaaacagaagaagttgaagacatattacaggaatttgttaat
aagtctctcttgttctgtgaccggaatggaaaatcatttctttattatttacatgatctg
caagtggatttccttactgaaaagaatcgcagccagcttcaggatctacacaagaagatg
gtcactcagttccagagacatcaccggctgcattctctttcaccagatcaggaggactgc
atgtattggtacaattttttggcctatcacatggccagtgctaatatgcacaaagaactg
tgtgctttaatgttttccctggattggattaaagcaaaaacggaacttgtaggccctgct
catctgattcatgaatttgtggaatacaggcatatattggatgaaaaggatggtacagac
tgtgagaatttccaggagtttttatctttaaatggacatcttcttggacgacagccattt
cctaatattgtgcaactgggcctctgtgaactggaaacttcagaggtttatcggcaagct
aagctgcaggccaagcaggaggtcgataacggaatgctttacctggagtgggtaaacaaa
aaaaacatgaagaacctctcccgcttggttgtccgcccccatacagatgctgtttaccat
gcttgcttttctgaagatggtcaaagaatagcttcttgtggagctgataaaactttacag
gtattcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgatgatgaagtg
ctttgctgtgcattctctgcagatgacagatttatagcaacctgctcagtggataagaaa
gtgaagatttggaattcaatgactggggaactagtgcgtatctatgatgagcactcagag
caagtcaattgctgccacttcaccaacaacagtaatcaccttctcttagccactggttca
aatgactacttccttaaactctgggatctgaatcaagaagaatgtcgaaataccatgttt
ggccatacaaattcagtcagtcactgcagattttcaccagatgatcaggttttggctagt
tgttcagctgatggaacattaaagctttgggatgtgaaatctgcaaacgagaggaaaagc
attaatgtgaagcagttcttcctgaactcagaggagcctcaggaggatctggaagtgata
gtgaaatgctgctcgtggtctgctgatggtgctaggataatggtggccgcgaaaaataaa
gtctttctctttgacattcacaccagtggcctgttggcagaaatccacacgggtcatcat
agcactgtccagtactgtgacttctccccctacaaccacttggcagtggtggctttgtcc
cagtactgtgtggagttgtggagtatggactcacgcctaaaagtagctgattgcagagga
catttaagttgggtccattgtgtgatgttttctactgatggatcatcatttttgacatct
tctgatgaccagacaatcaggctctgggagacaaagaaagtatgtaagaactctgctaca
gtgttaaagcaagaaatggatgttgtgtttcaagaaaatgaagtgacggttcttgcagtt
gacaatataaggcgtctgcaactcattaatggaaacacaggtcagattgattacctgact
gaagctcaagtgagttgctgttgtttaagtccaaatcttcagtaccttgcattcggaggt
gaagatggagccattcagattttagaactcctgaacaacagaatcttccaatccaggaat
gggcacaagagcactgttcgacacatccagttcacagctgatggaaagactcttatctca
agctctgatgattctgcagttcagatatggaattggcaatcagaggaccctttctttctc
caagcccaccaggaaacagtgaaagactttagactcttgaaaaattcaagactgctttcc
tggtcatttgatggaacagtaaaggtatggaatattattaccagaagactagaaaaagac
ttcgtgtgtcaccaggacacagttctttcttgtgatatttcctctgatgctactaagttt
tcttctacctctgctgacaagactgcaaagatttggcgttttgaactcctttctcctctt
catgaattgagaggccacaaaggctgtgtgcgctgctcttccttctctgtggacagtgcc
ctgttggcgactggagacgacaatggagaaatcaggatatggaatgtctcaaacggtgag
cttcttcatttgtgtgctccaatttcagtagaagaaggagctactactcatggaggctgg
gtgaccgacctttgcttttctccagacaccaaaatgcttgtttctgctggaggatatctc
aagtggtggaatgttgtcactggggaatcctcacagaccttctacacaaacggaaccaat
cttaagaaaatacatgtgtcccctgacttcaaaacatatgtgactgttgataatcttggt
attttatatattttaaagattttagaataa

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