Cervus canadensis (wapiti): 122423969
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Entry
122423969 CDS
T07554
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4 isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03250
Viral life cycle - HIV-1
ccad03260
Virion - Human immunodeficiency virus
ccad04060
Cytokine-cytokine receptor interaction
ccad04514
Cell adhesion molecules
ccad04612
Antigen processing and presentation
ccad04640
Hematopoietic cell lineage
ccad04658
Th1 and Th2 cell differentiation
ccad04659
Th17 cell differentiation
ccad04660
T cell receptor signaling pathway
ccad05135
Yersinia infection
ccad05166
Human T-cell leukemia virus 1 infection
ccad05170
Human immunodeficiency virus 1 infection
ccad05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
ccad05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122423969 (CD4)
03260 Virion - Human immunodeficiency virus
122423969 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122423969 (CD4)
04514 Cell adhesion molecules
122423969 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
122423969 (CD4)
04612 Antigen processing and presentation
122423969 (CD4)
04660 T cell receptor signaling pathway
122423969 (CD4)
04658 Th1 and Th2 cell differentiation
122423969 (CD4)
04659 Th17 cell differentiation
122423969 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
122423969 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
122423969 (CD4)
05170 Human immunodeficiency virus 1 infection
122423969 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
122423969 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
122423969 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccad04090
]
122423969 (CD4)
CD molecules [BR:
ccad04090
]
Proteins
122423969 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Tcell_CD4_C
ig
V-set
Ig_3
I-set
Ig_2
Receptor_2B4
P_proprotein
GBD_Hemicentin
Sp38
DUF7601
Ig_CYK3_C
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
122423969
NCBI-ProteinID:
XP_043297472
LinkDB
All DBs
Position
21:15810526..15834800
Genome browser
AA seq
455 aa
AA seq
DB search
MCPRTSLRHLFLVLQLAMLLAGTQGKTVVLGRAGDQAELPCQTSQKKNLAFNWKDSSQSK
ILGNYGSFLHKGNSELSHRAETKLNLWDQGSFPLIIKNLQVTDSGTYTCEVDNKKLQVEL
QVFRLTASSDSRVLMGQSLTLTLESPSGSNPSVQCKDPGNNRKEDLKSLSLAQVGLQDSG
TWTCTIYQSQQTLEIKIPIVVLAFQKAPKTVYVKEGEQAEFSFPLTFEDENLNGELRWQQ
ANGDSSSQSWVTFTLTNREVKVLKTAKDLRLLVGERLPLRFTLLRTLPQYAGSGTLTLDL
TKGKLQQEVKLVVMRVTKSPNSLTCEVLGPSSPRLTLNLKMGNQSMKDSNQSKSVTALEP
EAGTWQCLLSDKGKVLLESEINVLPSDLTQAWPKLLPVVFGGITGLLLLPVFCIVCVKCW
HRRRQAERMSQIKRLLSEKKTCQCPHRLQKTCNLT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccgaggacttctcttaggcacctgttcttggtgctgcaactggcgatgctcctg
gctggcactcagggaaaaacagtggtgctgggtagggcaggagaccaggcagagctgccc
tgccagacttctcagaagaagaacctggccttcaactggaaagattcttcccagtccaag
attttggggaattatggctccttcttgcacaaaggtaacagtgaactgagccatcgagcg
gaaaccaaattaaacctgtgggaccaaggatcctttcctctgatcatcaagaatctccaa
gtaactgactcggggacttatacctgtgaagtggacaacaagaagctccaggtggaactg
caggtgttcagactgactgccagctcagactcccgcgtgctgatgggacagagcctgacc
ttgactttggagagtccctctgggagcaacccttcagtgcaatgcaaggatccagggaat
aataggaaggaagacctcaagagcctgtcgctggcccaggtggggctgcaggacagtggt
acctggacgtgcactatctaccagagccagcagacactggagatcaaaatacccatcgtg
gtgctggccttccagaaggcccccaaaacagtctatgtgaaggagggggagcaggcggag
ttctccttcccactcaccttcgaggatgaaaatctgaatggggagctgagatggcagcag
gcgaacggggattcttcctcccaatcctgggtcaccttcaccttgacgaacagagaggtg
aaggtgctcaagactgccaaggacctcaggctccttgtgggggagaggctaccgctgcgt
ttcactctgctgcggactttgcctcagtacgcgggttctggaaccctgaccctggatctc
accaaggggaagttgcagcaggaagtgaagcttgtggtgatgagagtgaccaagtcccca
aacagtctgacctgtgaggtgctggggcccagctcaccaaggctgaccctgaacttgaag
atggggaaccagagtatgaaggactcaaatcagtcgaagtcggtgacagcgctggagcct
gaggctgggacgtggcagtgtctgctgagtgacaagggcaaggtcctgctggaatccgag
atcaacgtcttgccttcagacctcacccaggcctggccaaagctcctgcccgtggtgttc
gggggaatcacaggtctattgcttctccctgtcttctgcattgtctgtgttaaatgctgg
caccgcaggcgccaggcagaacggatgtctcaaatcaagaggctccttagtgagaagaag
acctgccagtgcccccaccggctccagaagacctgtaatctcacctga
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