Cervus canadensis (wapiti): 122424001
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Entry
122424001 CDS
T07554
Symbol
NR1H4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
122424001 (NR1H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122424001 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccad03310
]
122424001 (NR1H4)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122424001 (NR1H4)
Nuclear receptors [BR:
ccad03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
122424001 (NR1H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122424001
NCBI-ProteinID:
XP_043297529
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All DBs
Position
21:48376416..48457492
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AA seq
486 aa
AA seq
DB search
MVMQFQELENPVQISPCHSHTSSGFAMEVMSVKPAKGVLTEQVAGPLGQNLEVEPYSQYN
NVQFPQVQPQISSSSYYSNVGFYPQQPEEWYSPGIYELRRMPAETLYQGETEVVEIPVTK
KARLGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCV
MDMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQHADQAVHEDSES
RDLRQVTSTTKSCREKTELTPDQQNLLHYIMDSYSKQRMPQEITNKILKEEFSAEENFLI
LTEMATSHVQILVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSKKLPAGHTD
LLEERIRKSGISDEYITPMFSFYKSVAELKMTQEEYALLTAIVILSPDRQYIKDREAVEK
LQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHADMLMSWRVNDHKFTPLLC
EIWDVQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgcagtttcaggagttagaaaatccagtccaaatcagtccttgtcacagccac
acgtcttcaggattcgccatggaagtgatgagcgtgaagcctgccaaaggtgtactgaca
gaacaagtggcaggtcctctgggacagaatctagaagtggagccgtactcacaatacaac
aacgttcagtttccccaagttcaaccacagatttcctcttcttcctattattccaatgtg
ggtttctatccccagcagcctgaagagtggtactctcctggaatatatgaactcaggcga
atgcctgctgagactctctatcagggagagactgaggtagtggagattcctgtaacaaag
aaggcccgactgggagcctcagcagggagaatcaaaggggatgagctctgtgtcgtttgc
ggagacagggcttctggataccactataacgccctgacctgtgagggatgcaaaggtttc
ttcagaagaagcattaccaaaaacgccgtgtacaagtgtaaaaacgggggcaactgcgtg
atggacatgtacatgcgaaggaagtgccaagagtgtcgactaaggaaatgcaaagaaatg
ggaatgttggctgaatgtatgtatacaggcttgttaactgaaattcagtgtaaatctaaa
cgactgaggaaaaatgtgaagcagcacgcagatcaggccgtccatgaagacagtgaaagt
cgtgacctgcgacaggtgacctcgacgaccaagtcctgcagggagaaaactgaactcacc
ccagatcaacagaatcttcttcattatattatggattcatatagcaagcagaggatgcct
caggaaataacaaataaaattttaaaagaagaattcagtgcagaagaaaactttctcatt
ttaactgaaatggctaccagtcatgtacagattctcgtagaattcacaaaaaaacttcca
ggatttcagacattggaccatgaagatcagattgctttgctaaaaggatctgcagttgaa
gctatgttcctccgttcagctgagattttcagtaagaaacttccagctggacatactgac
ctactggaagaaagaattcgaaagagtggtatctctgatgaatatataacgcctatgttt
agcttttataaaagtgttgcagaattgaaaatgactcaagaagagtatgctctgcttaca
gcaattgttatcctctctccagacagacaatacatcaaggacagagaggccgtagagaag
cttcaggaaccactgcttgatgtgctacaaaagttgtgtaagattcaccagcctgagaat
cctcaacattttgcctgtcttctgggtcgcctgactgagttgaggacattcaaccatcac
cacgcagacatgcttatgtcatggagagtgaatgaccacaagtttacgccacttctctgt
gaaatctgggatgtgcagtga
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