Cervus canadensis (wapiti): 122424330
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Entry
122424330 CDS
T07554
Symbol
PLXND1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
122424330 (PLXND1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
122424330
NCBI-ProteinID:
XP_043297983
LinkDB
All DBs
Position
22:complement(4445667..4493778)
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AA seq
1931 aa
AA seq
DB search
MARSAAGGAPLSARAAAASPLPPRPPFRAPQSPPPPPLLWLLLLLGAARIGALEIQRRFP
SPTPTNNFALDGAAGTVYLAAVNRLYQLSGANLSLEAEAAVGPVADSPLCHAPQLPQASC
EHPRRLTDNYNKILQLDPGQGLVVVCGSIYQGFCQLRRRGNISAVAVPFPPAAPPAAPVT
VFPSMLNVAANHPNASTVGLLLPPAAGAGGSRLLVGATYTGYGSAFFPRNRSLEDHRFEN
TPEIAIRSLDARGDLAKLFTFDLNPSDDNILKIKQGAKEQHKLGFVRAFLHPPDPRPGAQ
TYAYLALNSEARAGDKESQARSLLARICLPRGAGGDAKKLTESYIQLGLQCAGGAGRGDL
YSRLLSVFPTRELLFAVFERPQGTPAARAAPAALCAFRFADVQAAIRAARNACFVDPAPD
VVAVLDSVVQGTGPACERKRNIQLQPEQLDCGAAHLQHPLSVLQPLKALPVFRAPGLSSV
AVAGVGNYTVVFLGTVSGRLLKINLNESMQVVSRKVVTVAYGEPVHHVMQFDPADPGYLY
LMTSHQMARVKVAACAAHTTCGDCVGAADAYCGWCALETRCTLQQDCANSSQPHFWTSAS
EGPGRCPAMTVLPAEINVHQEYPGMILQISGSLPSLSGMEMACDYGHGIRTVARVPGPAF
GHQIAYCNLLPKDQFPPFPPHQDHVTVEMSVRVHGQNIVRANFTIYDCGRVGQVYPHTAC
TSCLSAQWPCFWCTQQHACVSNQSRCEASPNPTSPQDCPQILPSSLAPMPTGGSQSIPVH
LANAAFFQGAALECSFGPEETFEAVWVNESAVRCNHVVLHTTQKSQVFPLSLQLKGRPAR
FLDSPDPMTVEVYNCAVGSPDCSQCLGREDLGHLCVWSDSCRPRGTLQPPPGTCPAPEIR
AIEPLSGPLDGGTRLTIRGRNLGRRFSDVAQGVWIGSVACEPLANRYTVSEEIVCATGPA
PEAFSDVVTVNASKEGRSRERFSYVLPLVHSLEPTMGPKAGGTRITIHGSDLHVGSELQV
LVNNTEPCTELLRSDASIACTVPGGALPAMVPVCVRFEQRGCVRGGLSFQYMPNPVITAI
SPHRSHVSGGRTITVAGERFHMVQKVSMAVHHIGREPTLCKVLNSTRITCPSPGALSNAS
APVDFFLNGRVYADEAAVAEELLEPEEAQRGSQFRLDYLPDPQFSTAKREKWIKHHPGEP
LTLVIHKEQDGLGLESHEYRVKIGQVACDIQIVSERVIHCSVNESLGTAEGQLPITIQVG
NFNQTIATLQLGGSETAIIVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEM
ESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYVLP
SQTLNSQGSSPVQETHPLLGEWKIPESCRPNMEEGISLFSSLLNNKHFLIVFVHALEQQK
DFAVRDRCSLASLLTIALHGKLEYYTGIMKELLVDLIDASAAKNPKLMLRRTESVVEKML
TNWMSICMYSCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAK
PRNLNVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASS
TQSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDNTLGRVKDLDTEKYF
HLVLPTDELAEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPP
LAVKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDAC
LSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMTPLSEQEMN
AHLAEESRKYQNEFNTNVAMAEIYKYAKRYRPQIMSALEANPTARRTQLQHKFEQVVALM
EDNIYECYSEA
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtagcgcggcgggcggcgcaccccttagcgcccgggccgccgcggccagcccc
ctgccgccgcgcccgccattccgggccccgcagtccccgccgccgccgccgctgctttgg
ctgctgctgctcctgggggcggcgcggatcggcgccctggagatccagcgccggttcccc
tcgcccacgcccaccaacaacttcgccctggacggcgcggcggggaccgtgtacttggcg
gccgtcaaccgcctctaccagctgtcgggcgccaacctgagcctggaagccgaggcggcc
gtgggcccggtggccgacagcccgctgtgtcacgccccgcagctcccgcaggcctcgtgt
gagcacccgcggcgcctcaccgacaactacaacaagatcctgcagctggacccgggccag
ggcctggtggtcgtgtgcggctccatctaccagggcttctgccagctgcggcggcgaggc
aacatctcggcggtggccgtgcccttcccgcccgccgcgccgcccgccgcgcccgtcacg
gtgttccccagcatgctgaacgtggcggccaaccaccccaacgcgtccaccgtggggctg
ctcctgccgccggccgccggcgccgggggcagccgcctgctcgtgggcgccacgtacacg
ggctacggcagcgccttcttcccgcgcaaccgcagcctggaggaccaccgcttcgagaac
acgcccgagatcgccatccgctccctggacgcgcgcggcgacttggccaagctcttcacc
ttcgacctcaacccctccgacgacaacattctcaagatcaagcagggcgccaaggagcag
cacaagctgggcttcgtccgcgccttcctgcacccccccgacccgcgacccggcgcgcag
acctacgcgtacctggcgctcaacagcgaggcgcgcgcgggcgacaaggagagccaggcg
cggagcctgctggcgcgcatctgcctgccccgcggcgccggcggcgacgccaagaagctc
acggagtcctacatccagctgggcttgcagtgcgcgggaggcgcgggccgcggcgacctc
tacagccgcctgctgtccgtcttccccacgcgcgagctgctcttcgcggtcttcgagcgg
ccgcaggggaccccggcggcccgcgccgctcccgccgcgctctgcgccttccgcttcgcc
gacgtgcaagccgcgatccgcgccgcgcgcaacgcctgcttcgtggatcctgcgcccgac
gtggtggcggtgctcgacagcgtggtgcagggcaccgggccggcctgcgagcgcaagcgc
aacatccagctgcagccggagcagctggactgtggggccgcccacctgcagcacccgctg
tccgtcctgcagcccctgaaggccttgcccgtgttccgagcgccgggcctctcctccgtg
gccgtggccggggtgggcaactacacggtggtcttcctgggcacggtcagcgggcggctg
ctgaagatcaacctgaacgagagcatgcaggtggtgagccggaaggtggtgacggtggcc
tatggggaacctgtgcaccacgtgatgcagtttgaccccgcggacccgggttacctgtat
ctgatgacgtcccaccagatggccagggtgaaggtcgccgcgtgcgccgcgcacaccacc
tgcggggactgcgtgggcgcggccgacgcctactgcggctggtgcgccctggagacgcgg
tgcaccctgcagcaggactgcgccaactccagccagccgcacttctggaccagtgccagc
gagggtcccggccgctgccccgccatgaccgtcctgccggccgagatcaacgtgcaccag
gagtacccgggtatgatcctgcagatctcggggagcctgcccagcctcagtggcatggag
atggcctgtgactatggccacggcatccgcacagtggctcgggtcccgggcccagccttc
ggccaccagatcgcctactgcaacctcctgcccaaggatcagttcccgcccttcccgccc
caccaagaccacgtgaccgtcgagatgtcggtgagggtccacgggcagaacatcgtcagg
gccaacttcaccatctacgactgcggccgggttgggcaggtgtacccacacacagcttgc
accagctgcctgtcagcacagtggccctgtttctggtgcacccagcagcacgcctgcgtc
tccaaccagtctcggtgtgaagcctcaccaaatcccacgagcccccaggactgcccgcag
atcctgccctcctccctggcccccatgcccacgggcggctcccagagcatcccggtgcac
ttggccaacgccgccttcttccagggtgcagccctggagtgtagcttcggtccggaggag
acctttgaagccgtgtgggtgaacgaatcggccgtacgctgcaatcacgtggtgctgcac
acgacccagaagagccaggtatttccactcagcctccaactaaaggggcggccggcccgg
ttcctggacagccctgaccccatgacagtggaggtctacaactgtgccgtgggcagcccc
gactgctcccagtgcctgggccgggaggatctgggccacctgtgtgtgtggagcgacagc
tgccgcccgcgggggaccctgcagcccccgcctggcacctgccccgcccccgagatccga
gcgattgagcccctgagcggccccttggacggcgggacccggctgaccatccgcggcagg
aacctgggccggcggttcagcgacgtggcccaaggcgtgtggatcggcagcgtggcctgt
gagccgctggccaacagatacacggtgtcagaggagatcgtgtgcgccacgggcccagcc
ccagaggcgttctcggacgtggtgacagtgaacgcctccaaggagggcaggtctcgggag
cgcttctcctacgtgctgcccctggtccactccctggagcccaccatgggccccaaagca
gggggcaccaggatcaccatccacgggagcgacctccacgtgggctccgagctccaggtc
ctggtgaataacacagagccctgcacagagctgctgcgctcggacgccagcatcgcctgc
acggtgccaggtggcgccctgccggccatggtgcccgtgtgcgtgcgcttcgagcagcgg
ggctgcgtgcgcggcggcctcagcttccagtacatgccgaacccggtcatcacggccatc
agcccccaccgcagccacgtcagtggcggcaggaccatcacggtggccggcgagcgcttc
cacatggtgcagaaggtgtccatggccgtgcaccacatcggccgcgagcccacgctctgc
aaggtcctcaactccacccgcatcacctgcccgtcgcccggggctctgagcaacgcctcg
gcccccgtggacttcttcctcaacggccgggtctacgcagacgaggcggcggtggccgag
gagctgctggagcccgaggaggcccagcggggcagccagttccgcctggactacctcccc
gacccgcagttctccacggccaagcgggagaagtggatcaaacaccaccccggggagccc
ctcacgctggtgatccacaaggagcaggacgggctggggctcgaaagccacgagtaccgc
gtcaagatcggccaggtggcctgcgacatccagatcgtctccgagagagtcatccactgc
tccgtcaacgagtccctgggcacggccgaggggcagctgcccatcacaatccaagtaggg
aacttcaaccagaccatcgccacgctgcagctggggggtagcgagaccgccatcatcgtg
tccatcgtcatctgcagcgtcctgctgctgctgtctgtggtcgccctgttcgtcttctgc
accaagagccgccgcgccgagcgctactggcagaagacgctgctgcagatggaggagatg
gagtcccagatccgggaggaaatccgtaaaggcttcgcagagctgcagacggacatgaca
gacctgaccaaggagctgaaccgcagccagggcatccccttcctggagtacaagcacttc
gtgacccgcaccttcttccccaagtgctcctccctctacgaagagcgttacgtgctcccc
tcccagaccctcaactcccagggcagctccccggtgcaggagacccacccgctgctggga
gagtggaagatccccgagagctgccggcccaacatggaagagggcatcagtctgttctcc
tcgctgctcaacaacaagcacttcctcatcgtcttcgtccacgcgctggagcaacagaaa
gacttcgcggtgcgggacaggtgcagcctggcctccctgctgaccatcgcgctccacggc
aagctcgagtactacacgggcatcatgaaggagctgctggtggacctcatcgacgcctcg
gccgccaagaaccccaagctgatgctgcgccgcacggagtccgtggttgagaagatgctc
accaactggatgtccatctgcatgtacagctgcctgcgggagacagtgggggagcccttc
ttcctgctcctgtgcgccatcaagcagcagatcaacaagggctccatcgatgccatcacg
ggcaaggcccgctacacgctcaatgaggagtggctgctgcgagaaaacatcgaggccaag
ccccggaacctgaacgtgtccttccagggctgcggcatggactcgctgagcgtgcgcgcc
atggacacagacacgctgacacaggtgaaggagaagattctggaagccttctgcaagaac
gtgccctactcccagtggccgcgcgctgaggacgtggacctagagtggttcgcctcaagc
acacagagctacatcctgagggacctggacgacacctcggtggtggaggacggccgcaag
aagctcaacacgctggcccactacaagatccccgaaggcgcctccctggccatgagcctc
acggacaagaaggacaacaccctgggccgagtgaaagacttggacacagagaagtatttc
cacttggtcctgcccacggacgagctggcggagcccaagaagtcccaccggcagagccac
cgcaagaaggtgctcccagagatctacctgacccgcctgctctccaccaagggcacgctg
cagaagtttctggatgacctgttcaaggccatcctgagcatccgggaagacaagccccca
ctggccgtcaagtacttctttgacttcctagaagagcaagcggagaagaggggcatctca
gaccccgacacgctgcacatctggaagaccaacagccttcctctgcgcttctgggtgaac
atcctgaaaaacccgcagtttgtctttgacatcgagaagacggaccacattgacgcctgc
ctctcggtcatcgctcaggccttcatcgacgcctgctccatctccgacctgcagctgggc
aaggactcaccaaccaacaagctgctctacgccaaggagatccccgagtaccggaagatc
gtgcagcgctactacaaacagatccacgacatgaccccgctcagcgagcaggagatgaac
gcgcacctggcggaggagtcgcggaaataccagaatgagttcaacaccaacgtggccatg
gcagagatctacaaatacgccaagaggtatcgcccgcagatcatgagcgccctggaggcg
aaccccacggcccggaggacgcagctgcagcacaaatttgagcaggtggtggccctcatg
gaggacaacatctacgagtgctacagcgaggcctga
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