Cervus canadensis (wapiti): 122429562
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Entry
122429562 CDS
T07554
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad02010
ABC transporters
ccad04145
Phagosome
ccad04612
Antigen processing and presentation
ccad05163
Human cytomegalovirus infection
ccad05168
Herpes simplex virus 1 infection
ccad05169
Epstein-Barr virus infection
ccad05170
Human immunodeficiency virus 1 infection
ccad05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122429562 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122429562 (TAP1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
122429562 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
122429562 (TAP1)
05168 Herpes simplex virus 1 infection
122429562 (TAP1)
05163 Human cytomegalovirus infection
122429562 (TAP1)
05169 Epstein-Barr virus infection
122429562 (TAP1)
09163 Immune disease
05340 Primary immunodeficiency
122429562 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122429562 (TAP1)
Enzymes [BR:
ccad01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
122429562 (TAP1)
Transporters [BR:
ccad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
122429562 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
ABC_ATPase
AAA_22
AAA_29
AAA_25
AAA_23
AAA_15
AAA_30
SRP54
Zeta_toxin
AAA_5
AAA_33
Motif
Other DBs
NCBI-GeneID:
122429562
NCBI-ProteinID:
XP_043305923
LinkDB
All DBs
Position
28:complement(38754404..38763466)
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AA seq
750 aa
AA seq
DB search
MACPGSPAPRGRPRLPRAAVAWLGTALLLLADWMLLRPALPRVASRLVPPALPLLRVWVA
GLSRWALLWLGARGVVGAALGFRKESTRVPGWLAVLEPLAAALGLALPGLALFRELVSWA
APGDADSAGPLNWGSRLDAFALSYGAALPAATLWYKIRSLWVQGTRGAFGLAMSRLLVFL
GPEKSHVQLILALVFLSCLGEMAIPFFTGRLTDWIVQDETGTAFTRNVTLMSVLAIASAV
LEFTADGIYNSTMGRMHSHLQGEVFQAVLRQETEFFQKNQTGEITSRVTDDTSTVSESLS
SDLSLLLWYFMRGLCLLGLMLWASPPLTVVTLVALPLLFILPEKLGKRHKVLAEQMQESL
AKSSQVAIEVLSAMPTVRSFANEEGEAQKFRQKLHEMMVLSRKEALAYAVDHWTSTLSGM
LLKVGILYFGGQLVTSGSVSSGRLVTFILYEIQFTIAVQVLLSSYPRVQKAVGSSEKIFE
YLDRVPNCPKSGSLASLTLRGLVQFQGVSFAYPNRPDAPVLQGLTFTLRPGEVTALVGPN
GSGKSTVAALLQNLYQPTEGQVLLDGAPLPEYEHRYLHRQVAAVGQEPLLFGRSFKGNIA
YGLVQEPTMEEITAAAVESGAHGFISELPKGYDTEVGEAGSQLSGGQRQAVALARALIRK
PRVLILDDATSALDANSQSLVEQLLYESPERGSRSVLFITQRLSSVEQADHILFLEGGTI
IEAGTHRQLMMNKGRYWAMVQAPGGPGAPE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcccggggtcccccgctccccgcggccgtccgcgcctcccccgcgccgccgtc
gcgtggctggggacggcgctgctgcttctcgccgactggatgctgctccggccggcgctg
ccccgagtggcgtcgcggctggtgccccctgcgctgcctctgctccgggtctgggtggcc
ggtctgagccgctgggcgctgctgtggctgggggcccgcggcgtcgtcggagccgcgctg
ggcttccggaaggaaagcacgcgagtcccggggtggctggctgttttagagccgctagcg
gcggcgctgggcttggccctgccgggactcgccttgttccgagagctggtctcctgggca
gcccccggggacgcggacagcgccgggcccctgaactggggaagtcgcctggacgccttc
gctctcagctacggggcagcactgcccgcggccaccctgtggtataagatcaggagcctc
tgggtgcaaggaactcgcggggcttttggcctggcgatgagtcggcttctagtcttcctg
ggtccggagaaaagccacgtgcagctcattctggccctggtgtttctctcctgtttgggg
gagatggccattccgttcttcactggccggcttaccgactggattgtacaggatgagaca
ggcactgccttcactcggaacgtaactctgatgtcggtcctcgccatagccagcgcagtg
ctggagttcacagctgatggaatctacaacagcaccatgggccgcatgcacagccacctg
cagggagaggtgtttcaggctgtcctgcgccaggagacagagttttttcaaaagaaccaa
acaggtgaaatcacatctcgggtcacagacgacacgtccactgtgagtgagtctctgagc
tcggatctcagcctgctgctgtggtacttcatgcggggcctgtgtctcctggggctcatg
ctctgggcgtccccgcccctcactgtggtcaccctggtcgccctgcccctgcttttcatt
ctgcctgagaagctggggaaacggcacaaggtgctggcagagcagatgcaagaatctctg
gcaaagtccagccaggtggccatcgaggtgctgtcagccatgcctacagttcggagcttt
gccaacgaagagggtgaggcccagaagttcaggcagaagctgcatgagatgatggtgctc
agccggaaggaggccctggcctacgcggtcgaccactggaccagcactctctcagggatg
ctgctgaaggtgggaatcctgtattttggtgggcagctggtgacaagtgggtctgtcagc
agtgggcgcctggtcacctttattctgtacgagatccagttcaccatagctgttcaggtg
cttctgtccagctatcccagggtgcagaaggctgtgggctcttcagagaaaatatttgaa
tacctggaccgggtccctaactgcccaaagagtggatcattggcttccttaacgttgcgt
ggcctcgtccagttccagggtgtctcctttgcctacccaaaccgtccggatgcccccgtg
ctgcaggggctgaccttcacccttcgtcccggggaggtgacggcgctggtggggcccaat
gggtctgggaagagcacggtggccgcgctgctgcagaacctgtaccagcccaccgagggc
caggtgctgctggacggggcgccccttcccgaatacgagcaccgctacctgcacagacag
gtggctgctgtgggacaagagcctctgctgtttggaagaagctttaaaggaaatattgcc
tatggcctggtccaggagccgaccatggaggaaatcacagctgctgcggtggagtccgga
gcccacggttttatctctgagctccctaaaggttacgacacagaggtgggtgaggctggg
agccagctgtcagggggtcagcgacaggcagtggccttggctcgagccctgatccgaaaa
ccacgcgtactcattctggatgatgctaccagcgccctggatgcaaacagccaatccctg
gtggagcagctgctctatgaaagccctgagcggggctcccggtcagtgctgttcatcacc
cagcgcctcagttcggtggagcaggctgaccacatcctctttctggaaggaggcacgatc
attgaggcaggaacccaccggcagctcatgatgaataaaggacgctattgggccatggtg
caggctcctggtgggccaggtgctccagaatga
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