KEGG   Cervus canadensis (wapiti): 122429902
Entry
122429902         CDS       T07554                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
  KO
K06752  MHC class II antigen
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad04145  Phagosome
ccad04514  Cell adhesion molecules
ccad04612  Antigen processing and presentation
ccad04640  Hematopoietic cell lineage
ccad04658  Th1 and Th2 cell differentiation
ccad04659  Th17 cell differentiation
ccad04672  Intestinal immune network for IgA production
ccad04940  Type I diabetes mellitus
ccad05140  Leishmaniasis
ccad05145  Toxoplasmosis
ccad05150  Staphylococcus aureus infection
ccad05152  Tuberculosis
ccad05164  Influenza A
ccad05166  Human T-cell leukemia virus 1 infection
ccad05168  Herpes simplex virus 1 infection
ccad05169  Epstein-Barr virus infection
ccad05310  Asthma
ccad05320  Autoimmune thyroid disease
ccad05321  Inflammatory bowel disease
ccad05322  Systemic lupus erythematosus
ccad05323  Rheumatoid arthritis
ccad05330  Allograft rejection
ccad05332  Graft-versus-host disease
ccad05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    122429902
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    122429902
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    122429902
   04612 Antigen processing and presentation
    122429902
   04658 Th1 and Th2 cell differentiation
    122429902
   04659 Th17 cell differentiation
    122429902
   04672 Intestinal immune network for IgA production
    122429902
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    122429902
   05164 Influenza A
    122429902
   05168 Herpes simplex virus 1 infection
    122429902
   05169 Epstein-Barr virus infection
    122429902
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    122429902
   05152 Tuberculosis
    122429902
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    122429902
   05140 Leishmaniasis
    122429902
  09163 Immune disease
   05310 Asthma
    122429902
   05322 Systemic lupus erythematosus
    122429902
   05323 Rheumatoid arthritis
    122429902
   05320 Autoimmune thyroid disease
    122429902
   05321 Inflammatory bowel disease
    122429902
   05330 Allograft rejection
    122429902
   05332 Graft-versus-host disease
    122429902
  09166 Cardiovascular disease
   05416 Viral myocarditis
    122429902
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    122429902
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccad04147]
    122429902
Exosome [BR:ccad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122429902
  Exosomal proteins of epithelial cells
   122429902
  Exosomal proteins of breast milk
   122429902
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 Ig_2 C2-set_3 I-set C2-set_2
Other DBs
NCBI-GeneID: 122429902
NCBI-ProteinID: XP_043306523
LinkDB
Position
28:complement(38818177..38824579)
AA seq 262 aa
MTVLLPLLLGLSLGCTGAGGFVAHVESTCLLDDDGNPKDFSYCISFNKDLLTCWDPLQAS
MVPREFGVLNSLAKYLSQFLNSNDALIQRLSNGLQNCAAHTQPFWSSLTHRTRPPTVQVA
KTTPFNTRESVMLACYVWGFYPADVIITWRRNEQEVLPHGRAHKIVQPNGDWTYQTVSHL
ATTPSLGDTYTCVVEHMGAPELILQDWTPGLSPVQTVKVSLSLVTLVLGLIVFVFGLRGW
WRATSSGYIFLPGSNYPEGQHN
NT seq 789 nt   +upstreamnt  +downstreamnt
atgactgtcctcctgccgctgctgctgggcctcagcctgggctgcaccggagcaggtggc
tttgtggcacacgtggaaagcacctgtctgttggatgatgatgggaatccaaaagacttc
tcatattgcatctccttcaacaaggatttgctgacctgctgggatcccctgcaggccagt
atggttcctcgtgaatttggggtgctgaacagcttggccaagtacctctcacagttcctc
aacagtaacgatgccctgatccagcgcttgtccaatggtctgcagaactgtgctgcgcac
acccagcccttctggagctctctgacccacaggacacgaccgccgaccgtgcaggtagcc
aaaaccactccttttaacacgagggagtctgtgatgctggcctgctacgtgtggggcttc
tacccagcggatgtgatcatcacatggaggaggaatgagcaggaggtcctccctcacggc
agggcccacaagatcgtccagcccaatggagactggacgtaccagaccgtctcccatttg
gccacaaccccctctcttggggacacctacacgtgcgtggtcgagcacatgggggctcct
gaactcatccttcaggactggactcctgggctgtcgcctgtgcagacggtgaaggtttcc
ttgtcgctggtaacgctcgtcctgggcctcatcgtcttcgtttttggtctgcgcggttgg
tggagagccacctcctccggctacattttcctcccggggtccaattatccagaaggtcag
cacaattga

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