Cervus canadensis (wapiti): 122431484
Help
Entry
122431484 CDS
T07554
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122431484 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122431484 (KDM2A)
04121 Ubiquitin system [BR:
ccad04121
]
122431484 (KDM2A)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122431484 (KDM2A)
Enzymes [BR:
ccad01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
122431484 (KDM2A)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122431484 (KDM2A)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122431484 (KDM2A)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
122431484 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122431484 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
122431484
NCBI-ProteinID:
XP_043308753
LinkDB
All DBs
Position
29:42474156..42562734
Genome browser
AA seq
1161 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSSDSSRGSQNGQVWESQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPTG
IEDEDALIADVKVLLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKPH
TMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMK
QSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGL
LNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPTS
MLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPS
GKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHCP
ARTPQRGDEEGLGGEEEDEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMSV
FRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLSW
TNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRD
LLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQS
SNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHFI
SDLSINSLYCLSDEKLIQKIS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaagggaaaagaacgtttgacttg
gaagagaaactccacaccaacaaatataatgcaaattttgttacttttatggaaggaaaa
gattttaatgtagagtatatccagcggggtggtttaagagatcctctgattttcaagaat
tccgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgtatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggaggagcgagaaaaactc
tataatgtcatcagcctagagtttagccacaccaggctggagaacatggtgcagaggccc
tccacggtggatttcattgactgggtagacaatatgtggccaaggcatttgaaagaaagt
cagactgaatcaacaaatgccatcttggagatgcagtatcctaaagtgcagaagtactgt
ctgatgagtgttcgaggctgctatactgacttccacgtggacttcggtggtacctctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtatcagattgccaacgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacacgttggtgtttggaggcaattttttg
catagcttcaatatccccatgcagttaaaaatatacaacattgaagatcgaacacgggtt
cctaataagttccgctatccattctactatgagatgtgttggtacgtgttggagcgctat
gtgtactgcataaccaaccgctctcacctaactaaggaatttcagaaagagtcccttagc
atggatttggagttaaatgggttggagtctggaaacggggatgaggaagcagtagaccga
gagccccggcgtttgagcagcagacgttctgtcctcaccagccctgtagccaacggggtc
aacctggattatgatggactgggcaaaacctgccgaagtcttccaagtctgaagaaaact
ttgtctggggactcatctgactctagccggggttcccagaatggccaagtgtgggaatcc
cagtgtagcccccgaaaggaccgacaggtgcatctgacccattttgagcttgaaggcctt
cgttgccttgtagataaattggaatctctgccactgcacaagaaatgcgtccctacaggg
atagaagacgaagatgctctcattgctgatgtgaaggttttgctggaggagcttgccaac
agtgatcccaagttagccctcactggagtccctatagtacagtggcccaaaagggataag
cttaaattcccaacccggccaaaggtgcgggttcctaccatacccatcacaaagcctcac
actatgaaaccagccccacggttaacacctgtgcgcccagccgctgcctctcccatcgtg
tctggagccagacggagacgagtgcgatgtcgaaaatgcaaagcctgcgtgcaaggagag
tgtggtgtttgtcactactgcagggacatgaagaagtttggggggcctggtcgcatgaag
cagtcctgtgttctccggcagtgcttggcacccagactgcctcactctgtcacatgttcc
ctttgtggagaggtggatcaaaacgaggagacacaggactttgagaagaaactcatggaa
tgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagaggggttg
cttaatgaggaattgccaaattgctgggagtgtccaaagtgctaccaagaggacagctca
gaaaaagcccagaagcgaaaaatggaagagagtgacgaagaagccgtgcaagccaaagtc
ctccggcccctgcggagctgcgacgagcccctcacgcccccacctcactcgcccacctcc
atgctgcagctcatccacgacccggcctccccccggggcgtggtgactcggtcatcccct
ggggccggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcggcag
ttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatcccagc
ggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcactgtc
acgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcaggcc
atcacggcctcctctgccaaccttcgccattccccccgtgtgctggtccagcactgccca
gcccgaaccccccagcgcggggatgaggaggggctggggggagaggaggaggacgaggag
gaggaggaggaggaagatgacagtgcagaggaggggggtgcggccaggctgaatggccgg
ggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtctgtc
ttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtggtat
aaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggctatc
gtaccccaggctctcagtggcatcatcaagaggcagccagttagcctcgacctcagttgg
accaacatctccaaaaaacagctgacatggctcgtcaataggctgccaggactgaaagac
ctccttctagcaggctgctcctggtctgcagtctctgccctcagcacctccagctgcccc
cttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgggac
ttgctgactccaccggcggataaaccgggccaggacaatcgcagcaagctccggaacatg
accgacttccggctggcgggccttgacatcacagatgccacgcttcgtctcatcattcgc
cacatgcccctcctgtctcgactcgacctcagtcactgcagccacctgacagaccagtcc
tccaatctcctcactgctgttgggtcttccactcgttactccctcacagagctcaacatg
gcaggttgcaataaactgacagaccagaccctgatctacctacggcgaatcgccaatgtc
accttgatcgaccttcgaggatgcaagcagatcactcgaaaagcctgcgagcacttcatc
tcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatacagaagatc
agctaa
DBGET
integrated database retrieval system
