KEGG   Cervus canadensis (wapiti): 122431882
Entry
122431882         CDS       T07554                                 
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
  KO
K03172  TNF receptor-associated factor 1
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad04064  NF-kappa B signaling pathway
ccad04210  Apoptosis
ccad04668  TNF signaling pathway
ccad05200  Pathways in cancer
ccad05202  Transcriptional misregulation in cancer
ccad05203  Viral carcinogenesis
ccad05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    122431882 (TRAF1)
   04668 TNF signaling pathway
    122431882 (TRAF1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    122431882 (TRAF1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122431882 (TRAF1)
   05202 Transcriptional misregulation in cancer
    122431882 (TRAF1)
   05203 Viral carcinogenesis
    122431882 (TRAF1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    122431882 (TRAF1)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd XLF_CC
Other DBs
NCBI-GeneID: 122431882
NCBI-ProteinID: XP_043309435
LinkDB
Position
30:complement(41839886..41870357)
AA seq 415 aa
MASGSASSPRPAPDENEFPFGCPPTACQDPPEPGPVCCAVCLSENARNGEDRICPKCKGE
DTPSESPGSLLSQEKDHPEVAEAGVGCPFAGVGCSFKGSPKFMEEHEVTSQAAHLNLLLG
FMKQWKAQLGSGLGYGPIALERNLSDLQLQGAVEVAGDLEVDCYRAPCSESQEELALQHF
MKEKLLTELEGKLCVFENIVAVLNKEVEASHLALAASIHQSQLDREHILRLEQRVLELQQ
TLAQKDQALGKLEQSLRLMEEASYDGTFLWKITNVSRRCQESACGRTVSLFSPAFYTAKY
GYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLSWPFRNKVTFMLLDQNNREHAIDA
FRPDLNSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETNT
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggcctctggctcggccagcagcccccgcccggcccccgatgagaatgagttccccttt
gggtgcccccccaccgcctgccaggaccccccagagcccgggcctgtctgctgcgccgtc
tgtctctctgagaatgcgaggaatggtgaggatcggatctgtcccaaatgcaaaggggaa
gacaccccatctgaaagtccaggaagccttctgtctcaggagaaggatcaccccgaggtg
gctgaggctggagtcgggtgcccctttgcaggtgttggctgctccttcaagggaagcccg
aagttcatggaggagcatgaggtcacctcccaggccgcccacctgaacctgctgttgggg
ttcatgaagcagtggaaggcccagctgggctctggcctggggtacgggcctatagccctg
gaacggaacctgtcggacctgcaactgcagggggccgtggaggtggccggggacctggag
gtggactgctaccgggccccctgctccgagagccaggaggagctggccctgcagcacttc
atgaaggagaagctcctgacggagctggaagggaagctatgtgtgttcgagaacatcgtg
gccgtcctcaacaaggaggtggaggcctcccacctggccctggccgcctccatccaccag
agccagctggaccgcgaacacatcctgaggctggagcagagggtgctggagttgcagcag
accctggcccagaaggaccaggccttgggcaagctggagcagagcctgcgcctgatggag
gaggcctcctacgacggcaccttcctctggaagatcaccaacgtctcccggcgttgtcag
gagtcggcctgcggcaggaccgtcagcctcttctccccagctttctacaccgccaagtat
ggatacaagttgtgcctgcggctctacctgaacggggatgggacggggaagaggacccac
ctgtccctcttcatcgtgatcatgagaggggagtatgatgctctgctgtcgtggcctttc
aggaacaaggtcaccttcatgctgctggaccagaacaaccgtgagcacgccatcgacgcc
ttccggcccgacctgaactcagcttccttccagcggccccagagtgaaaccaacgtggcc
agcggctgcccgctcttcttccccctcaacaagctgcagtcgcccaagcacgcctacgtg
aaggacgacaccatgttcctcaagtgcatcgtggagacgaacacttag

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