Cervus canadensis (wapiti): 122433209
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Entry
122433209 CDS
T07554
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad00514
Other types of O-glycan biosynthesis
ccad04330
Notch signaling pathway
ccad05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122433209 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122433209 (LFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122433209 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccad01003
]
122433209 (LFNG)
Enzymes [BR:
ccad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
122433209 (LFNG)
Glycosyltransferases [BR:
ccad01003
]
Glycan extension
O-Glycan
122433209 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
122433209
NCBI-ProteinID:
XP_043311825
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All DBs
Position
32:complement(34164560..34172968)
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AA seq
379 aa
AA seq
DB search
MLKRCGRRLLLALAGALLACLLVLTADPPPPPVPAERGRRALRSLAGPSGAATAPGLEAA
AAAPGAPVREVHSLSEYFSLLTRSRRDAGPPPGGVPRPADGRPRPPVEQLAPRDVFIAVK
TTKKFHRARLDLLLETWISRHEEMTFIFTDGEDEALARRTGHVVNTNCSAAHSRQALSCK
MAVEYDRFIESGRKWFCHVDDDNYVNVRALLRLLGSYPHTQDVYLGKPSLDRPIQATERV
SENKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTIGYIVEAL
LGVPLVRCGLFHSHLENLQQVPASELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFR
SIHCHLYPDTPWCPRTAIL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctgcggccgccgcctgctgctggcgctggcgggcgcgctgcttgcctgt
ctgttggtgctcacggccgacccgccgccgcctccggtgcccgctgagcgcggtaggcgc
gcgctgcgcagcctggcgggcccctcgggggcggccacggcgcccgggctggaggcggcg
gcggcggcgcccggggcgcccgtccgcgaggtgcacagtctgtccgagtacttcagccta
ctcacccgctctcgcagagacgcgggcccaccgcccgggggcgtcccccgtcccgccgac
ggccgtccgcggcccccggtagagcagctggcgccgcgcgacgtcttcatcgcggtgaag
accaccaaaaagtttcatcgcgcgcgtctcgacttgcttctggagacgtggatctcgcgc
cacgaggagatgacgttcattttcacggacggggaagacgaggcgctggccaggcgcacc
ggccatgtggtcaacacgaactgctccgccgcccacagccgccaggcgctgtcctgcaag
atggcggtggagtacgaccgcttcatcgagtcggggaggaagtggttctgccacgtggat
gacgataattatgtgaacgtgcgcgccctgctgaggctgctgggcagttacccacacacg
caggacgtctacctgggcaagcccagcctggaccggcccatccaggccacggagcgcgtc
agcgaaaacaaggtgcgtcctgtccacttctggtttgccaccggcggggctggcttctgc
atcagccgagggctggccctgaagatgagcccctgggccagtggaggccacttcatgagc
acggctgagcggatccggctgccggacgactgcaccatcggctacatcgtggaggcgctg
ctgggcgtgcccctggtgcgctgcgggctcttccactcccacctggagaacctgcagcag
gtgcctgcctccgagctccacgagcaggtgaccctgagctacggcatgtttgaaaacaag
cggaatgccgtccacattaaggggcccttctcggtggaggctgacccgtcaaggttccgc
tccatccactgccatctgtacccggacacgccctggtgtccccgcactgctatcctctag
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