Cervus canadensis (wapiti): 122434373
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Entry
122434373 CDS
T07554
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad00310
Lysine degradation
ccad01100
Metabolic pathways
ccad04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122434373 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
122434373 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122434373 (SETDB1)
Enzymes [BR:
ccad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
122434373 (SETDB1)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122434373 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122434373 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
MBD
Tudor_5
SET
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
122434373
NCBI-ProteinID:
XP_043313595
LinkDB
All DBs
Position
2:18677897..18706706
Genome browser
AA seq
1290 aa
AA seq
DB search
MSSLPGCIGLAAATAAVESEEIAELQQSVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPAAPPAPPGPALSPQAGDSESLES
QLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTYRSPLGSTTSAPA
PSAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLL
VPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRSMQEIERYLFETGCDFLFLEMFCLD
PYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINT
GPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYEC
NKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDF
ADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEES
NDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQRENGLSEMSSKDSRPPDLGPPHTPVPP
SIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGRTGGGRGEA
EKASTSGLGFKDEGDIKQAKKEDPDDRNRMSVVTESSRNYGYNPSPVKPEGLRRPPSKTS
MHQSRRLMASAQSNPDDILTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSE
GDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFY
DGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTEL
TWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggcagcagcaacagcagcagtggagtctgaa
gaaattgcagagctgcaacagtccgtggttgaggagctgggtatctcaatggaggagctt
cgacagttcattgatgaagaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcagagctggagacttgggtaatacagaaggaatctgaggtggcccatgttgaccaa
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacagtaccgggacagcagctctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatcg
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagtagttcccaggatcta
cacaaaggaaccttgagtcaaatgtctggagagttgagcaaagatggtgacttggtcgtc
agcatgcgcatcctcggcaaaaagagaactaagacgtggcacaaaggcacccttattgcc
atccagacggttgggccagggaagaagtacaaggtgaaatttgacaacaaaggcaagagt
cttctgtcaggaaaccacattgcctatgattaccaccctcctgctgacaagttgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgttacacagtctgaactatatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatatcctgccgagacttcatagaagagtatatcaccgcttac
cccaaccgccccatggtgttgctcaagagtggccagctgatcaagactgagtgggaaggc
acgtggtggaagtcccgggtcgaggaggtggacggcagcctagtcaggatcctctttctg
gatgacaaaagatgtgaatggatctatcgaggctctacacgactggagcccatgttcagc
atgaagacatcatccgcctctgcactagagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgagaagcaaaggccccgtggtccagtacactcaggatctaaca
agtactggaacccagttcaagcctatggaacccccacagccgacagccccagctgcccca
cctgccccacctggtccagctctgtccccccaggcaggtgacagtgaaagcttggaaagc
cagcttgcccaatctcggaagcaggtagccaaaaaaagcacatctttccggccaggatct
gtgggctctggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtggg
aaacctgggatcaatcagacatataggtcacctttaggctccacaacctcggccccagca
ccctcagctcccccagctcccccagccttccatggcatgctggagcgggcccctgcagag
ccctcctaccgcgctcccatggagaagcttttctacttacctcatgtctgcagctatact
tgtctgtctcgggtcagacctatgagaagtgagcagtatcggggcaagaaccctctgtta
gtcccactactctatgacttccggcgaatgacagcccggcgccgagttaaccgcaagatg
ggctttcatgttatctataagacaccctgtggcctctgccttcggtcaatgcaggagatt
gagcgttacctttttgagactggctgtgacttcctcttcctggagatgttctgtttggat
ccatatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggac
atcacctatggaaaggaagatgttcctctatcctgcgttaacgagattgacacaactccc
ccaccccaggtggcctacagcaaggaacggatcccgggcaagggtgttttcattaacaca
ggccctgaatttcttgttggctgtgactgcaaagatgggtgccgggacaagtccaagtgt
gcctgccatcagctcactatccaggctacagcctgcaccccaggaggccaaatcaacccc
aactctggctaccaatacaagagactagaagaatgtctgcccacaggagtttatgagtgt
aataaacgctgcaaatgtgaccctaacatgtgcacaaaccggttggtacagcatggcctg
caagttcgtctgcagctcttcaagacccagaacaagggctggggtatccgttgcttggat
gacattgccaaaggctcctttgtctgtatttatgcagggaagatcctgacagatgacttt
gctgacaaagagggcctagaaatgggtgatgagtactttgccaatctggaccatattgag
agcgtggagaacttcaaggaggggtatgagagtgatgccccctgttcctctgacagcagt
ggtgtagacttgaaggaccaggaagatggcaacagcggcacagaggaccccgaggagtcc
aacgacgacagctcggacgacaacttctgtaaggacgaggacttcagcaccagctcggtg
tggcgcagctacgccactcggcggcagacccggggccagagggagaacggactgtctgag
atgtcttccaaggactctcgccccccagacctggggcccccacatactcctgtccctccg
tcaatccctgtaggtggctgcaatccaccttcctctgaagagacacctaagaacaaagtg
gcctcgtggttgagctgcaacagtgtcagtgaaggtggctttgctgactctgacagccgt
tcatccttcaagactagtgaaggtggggaaggccgcactgggggaggcagaggggaagca
gagaaggcttccacctcagggctgggcttcaaggatgagggagacatcaagcaggccaag
aaggaggaccctgatgaccgaaacaggatgtcagtagttactgaaagctctcgaaattat
ggttataatccttctcctgtgaagcctgaaggacttcgccgcccaccaagtaagactagt
atgcatcagagccgacgactcatggcctctgctcagtcaaaccctgatgatatcctgacc
ctgtccagcagcacagaaagtgagggggaaagtgggaccagccggaagcccactgctggc
cagacttcagccacagccgtggacagtgatgatatccagaccatctcctctggctctgaa
ggggatgactttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagta
aaatcaacccggggttttgctttgaaatcaacccatgggattgccattaaatcaaccaac
atggcatccgtggaaaagggggagagtgcacccgttcgtaagaacacacgccagttctat
gatggggaggagtcttgctacatcatcgacgccaagcttgaaggcaacctgggccgctac
ctcaatcacagttgcagccccaacctgtttgtccagaatgtcttcgtggatactcatgat
ctccgcttcccgtgggtggccttctttgccagcaagagaatccgggctggcacagagctt
acctgggactacaactatgaggtgggcagcgtggaaggcaaggagctgctttgctgctgc
ggggccatcgaatgcagagggcgtcttctttag
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