Cervus canadensis (wapiti): 122434967
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Entry
122434967 CDS
T07554
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04360
Axon guidance
ccad04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122434967 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
122434967 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccad01009
]
122434967 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122434967 (TRPC5)
Protein phosphatases and associated proteins [BR:
ccad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122434967 (TRPC5)
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122434967 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
122434967
NCBI-ProteinID:
XP_043314720
LinkDB
All DBs
Position
X:complement(141885275..142049364)
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AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHQRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNVGCKKKACHGPPLIRTMPRVGGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQPHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEARGTAQSTECPLACSSSLHCVSSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcacaactgtactacaaaaaggtcaactactcaccgtacagagaccgcatcccccta
cagattgtgagggcagagacagagctctctgctgaggagaaggccttcctcaatgctgtg
gagaagggggactacgccactgtgaagcaggccctccaggaggccgagatctactacaat
gtcaacatcaactgcatggacccactgggccgcagcgccctgctcattgccattgagaat
gagaacttggagatcatggagctcctgctgaaccacagcgtgtacgtcggcgatgcactg
ctctacgccatccgcaaggaagtggtgggtgctgtggagcttctgctcagctacaggcgg
cccagtggagagaagcaggtccccactcttatgatggacacccaattctctgagttcaca
ccggacattactcccatcatgctggctgcccacaccaacaactatgaaatcatcaaactg
cttgtccaaaaacgggtcactattccccggccccaccagattcgctgcaactgtgtggag
tgtgtgtccagttcagaggtagacagcctgcgccactcccgctcccgactgaacatctat
aaagccctggcaagtccctcactcatcgccttatcaagcgaggaccccatcctaactgcc
ttccgcctgggctgggagctcaaggagcttagcaaggtggagaatgagttcaaggctgag
tacgaggagctctcccagcagtgcaagctctttgccaaagacctgctggaccaggctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcaaaagtaccatgacctagccaaactgaaggtggccatcaaataccaccagaaagag
tttgtggcccagcccaattgccaacagttgcttgccactctgtggtacgacggcttccct
ggatggcggcggaaacactgggtcgtcaagcttctgacgtgcatgaccattgggttcctg
tttcccatgctgtctattgcttatctcatctcacccaggagcaaccttgggctgttcatc
aagaaacccttcatcaagtttatctgccacacagcgtcatatctgaccttcctcttcatg
cttctcctggcttctcagcacatcgtcaggacagacctccacgtacagggacctcccccg
actgtcgtggagtggatgatactgccttgggttctcggtttcatttggggggagataaag
gaaatgtgggatggtggatttactgaatatatccatgactggtggaacctgatggatttt
gcaatgaactcactctacctggcaactatttccttgaagattgtagcctatgtcaagtat
aatggttcccgtccaagggaagaatgggaaatgtggcacccgactctgattgcagaagct
ctctttgcgatatccaacattttaagttcattgcgtctcatatccctgttcacagccaac
tcccacttagggcctctgcagatctctttggggcgcatgttgctcgatatcctcaaattc
ctctttatctactgcctggtactgctggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcaatcgatgagcccaacaactgcaaggggatccgatgcgagaaa
cagaacaatgccttctccacgctctttgaaacccttcagtccctcttctggtctgtattc
ggccttttaaatctctatgtcaccaacgtgaaagccagacatgaattcacagagtttgtg
ggagcgaccatgtttggtacatacaatgtcatctccttggtagtgctgctgaacatgctg
atcgccatgatgaacaactcctaccagcttattgctgatcatgctgatattgagtggaag
tttgcaaggacgaagctctggatgagttactttgacgaaggtggcaccttgccacctcct
ttcaacattatccccagccccaagtcatttctataccttggcaactggttcaacaacacc
ttctgccctaaaagagaccctgatggtagacgaagaaggcacaacttgagaagcttcaca
gaacgccatgctgacagcctgatacagaaccaacattaccaggaagttatcaggaattta
gtcaaaagatatgtggcagctatgataagaaattccaaaacaaatgagggactaacagaa
gaaaattttaaggaattaaagcaggatatctccagctttcgatatgaagtgcttgacctc
ttgggaaacaggaagcaccaaaggagaagtttttccactagcagcactgaactctctcag
agggatgataccaatgatggcagtggtggggctcgggccaaatcgaagagtgtttctttc
aatgtaggctgcaagaaaaaagcctgccatgggccacctctcatcaggactatgccaaga
gtcggtggtgcccaaggcaagtcaaaagctgagtcatcaagcaaacgatccttcatgggt
ccctctctcaagaaactgggtctcctattctccaagtttaatggtcatatgtccgaaccc
agttcagagccaatgtacacaatctctgatggaattgttcagccacactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagcccggggcactgctcagagcactgaatgccct
ctagcctgttccagctctcttcactgcgtttccagcatctgttcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacatggggagaggcttgtgacctgctcatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa
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