Cervus canadensis (wapiti): 122438623
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Entry
122438623 CDS
T07554
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122438623 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122438623 (IRF5)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122438623 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
122438623
NCBI-ProteinID:
XP_043319615
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Position
3:88006316..88020055
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AA seq
499 aa
AA seq
DB search
MNQPAPAALLPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFYIPWRHATRHGPSHDGD
NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
CSNGPAPAESQPSEDNAEEEEEEELQKMLPGLSITEAVQPGPAMAPYSLPKEDVKWPPTL
QPPVVLAPPAPGPNLLIPAPGNAADFGEVFSEVLPSSHPQPGPLSTSLPPTGEQLLPDLL
ISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVSLEQVRF
PSPEDIPSEKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHGSHPN
PIQREVKTKLFSLEDFLNELILFQKGQTNTPPPFEIFFCFGEEWPDCKPREKKLITVQVV
PVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWLSQQHLQPVAQTPA
MPGLSAAQGPWPMHPVDMQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccggcccccgccgccctgcttccgccccgccgcgtgcggctgaagccctgg
ctggtggcccaggtcaacagctgccagtacccagggcttcagtgggtcaatggggaaaag
aaattgttttacatcccctggcgccacgccacgcggcacggccccagccatgacggagat
aacaccatcttcaaggcctgggccaaggagacggggaagtacaccgagggtgtggatgag
gccgatccggccaagtggaaggccaacctgcgctgtgccctgaacaagagccgtgacttc
cgcctcatctatgacgggccccgggacatgccacctcagccctacaagatctacgaggtc
tgctccaatggcccggctcccgcagagtcacagcccagtgaggataacgctgaagaggaa
gaagaggaagaactccagaagatgttaccaggcctgagcatcacagaagcagtgcagccc
ggccctgccatggcaccctattctttacccaaagaggatgttaagtggccacccactctc
cagccacctgtggtgttggccccccctgctccaggccccaatcttctgatccctgctcct
ggcaacgccgctgactttggggaggtgttttctgaggtcctgccgagctcgcacccgcag
cctgggcccctgtctaccagcctgccccccacaggcgaacaactcctgcccgacctgttg
atcagcccccacatgctgcctctgaccgacctggagatcaagttccaataccggggccgg
ccaccccgggccctcaccatcagcaaccctcaaggctgccggctcttctacagccaactg
gaggccacccaggagcaggtggagctctttggccccgtgagcctggagcaagtgcgcttc
cccagccccgaggacatccccagcgagaagcagcgcttttataccaaccagctgctagac
gtcctggaccgtgggctcatccttcagctacaaggccaggatctgtatgccatccgcctg
tgccagtgcaaggtgttctggagcgggccctgtgcctcagcccatggctcacaccccaac
cccatccagcgggaggtcaagaccaaactcttcagcctggaggactttctcaatgagctc
atcctattccagaagggccagaccaacaccccacccccgtttgagatcttcttctgcttt
ggggaggagtggcctgactgcaaaccccgggagaagaagctcatcactgtacaggtggta
cccgtagcagcccggctgttgttggagatgttctcgggggagctttcttggtcagctgac
agcatccggctacagatctcaaacccagacctcaaagaccgcatggtggaacagttcaag
gagctccatcacatctggctgtcccagcagcatctgcagcctgtggcccaaacccctgcc
atgcccggcctcagtgctgcacagggaccctggcccatgcacccggttgacatgcagtaa
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