Cervus canadensis (wapiti): 122439599
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Entry
122439599 CDS
T07554
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122439599 (SCN4A)
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122439599 (SCN4A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
122439599
NCBI-ProteinID:
XP_043320720
LinkDB
All DBs
Position
1:14450397..14502692
Genome browser
AA seq
1816 aa
AA seq
DB search
MANASLPTVVPLGPESLRPFTRESLAAIERRVLEEETRQLRNKQMEIEETERKPRSDMEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYLLSPFSIV
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSNPPSWSKHVEYTFTGIYTFESLIKILARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNSTWFGNDTW
DGQESWASNYTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEGYECIKAGRNPNY
GYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILA
VVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEELEKAKAAQALEGGEVDGDPAHSK
DCNGSLDTSAGEKGPPRPSCGTDSGISDAMEELEEAHQKCPPWWYKCSHKVLIWNCCTPW
VKFKKIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLNVGNLVFTGIFTAE
MVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAADCSLPRWHM
HDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSS
FSADSLAASDEDGEMNNLQIAIARITWGIGFAKAFLVGLLHGKVLSPKVIMLSLGSIGEA
GEAGEAPESAPEDEKKEPPPEEDGKDLKKDNHILNHMGLADGPPPSIELDHLNFINNPYL
TIHVPIASEESDLEMPTEEETDTFSEPEDVKKPLQPLDGNSSVCSTADYKPPEDDPEEQA
EDNPDGEQPEECFTEACVQRFPFLYVDISQGRGKKWWTLRRACFKIVEHNWFETFIVFMI
LLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYFTNAWCWLD
FLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFEITEVNNKSECESLMHTGQVRWL
NIKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPMYEVNLYMYLYFVIFIIF
GSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNK
IQGLVYDLVTKQAFDITIMILICLNMVTMMVETDDQSQLKVDILYNINMVFIIIFTGECV
LKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRL
IRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDMFNFET
FGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPDLENPGTSVRGDCGNPSIGICFFCSY
IIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIDYSRLS
DFVDTLQEPLRIAKPNKIKLITMDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKETM
EEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRSVKQASYMYRHNHDGG
GDGAPEKEGLIADTMSKMYGPDNGNSGVPSKEEERGSTGDPGPAMGLRPVRPSDAPLPPA
PPPGQTVRPGVKESLV
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgcgtctctgcccaccgtggtgcctctgggccccgagagcctacgccccttc
acccgggagtccctggcagccatagagcgccgggtgttggaggaggagacccggcagttg
cggaacaagcagatggagatcgaggagaccgagcggaaaccgcgcagcgacatggaggct
ggcaagaatctgccgctcatctatggggatcccccgccggaagtcatcggcatccccctg
gaggatctggatccctactacagcgacaagaagaccttcatcgtgctcaacaagggcaag
tccatcttccgcttctcagccacgcctgccctctacctcctgagccccttcagcatcgtc
agacgctgtgccatcaaggtgctcatccactcgctgttcagcatgttcattatgatcacc
atcctgaccaactgcgtgttcatgaccatgagtaacccgccttcctggtccaagcacgtg
gagtacaccttcacagggatctacaccttcgagtccctcatcaagatcctggcccgaggc
ttctgcatcgatgacttcacattcctccgggatccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggaatttgtggacttgggcaacatctcagcgctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagaccatcgtg
ggggccctgatccagtcggtgaaaaagctctcggacgtaatgatcctcaccgtcttctgc
ctgagcgtctttgctctggtggggctgcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccttcaatgacaccaacagcacgtggttcggcaatgacacctgg
gacggccaggagagctgggccagcaactatacctttgactgggatgcctacatcaatgat
gaagggaacttctatttcttggagggctccaacgacgccctgctctgtgggaacagcagc
gatgctgggcattgccctgagggttacgagtgcatcaaggccgggcggaaccccaactac
ggctacaccagctatgacaccttcagctgggccttcctggctctcttccgcctcatgaca
caggactattgggagaacctcttccagctgacccttcgagcagccggcaagacctacatg
atctttttcgtggtcatcattttcctgggctccttctacctcatcaacctgatcctggcc
gtggtggccatggcctatgctgagcagaacgaggccaccctggccgaagatcaggagaaa
gaagaggagtttcagcagatgctggagaaattcaaaaaacagcaggaggagctggagaag
gccaaagctgcccaggctctggaaggtggggaggtggacggggacccagcacacagcaaa
gactgcaatggcagcctggacacatcagcaggggagaaggggcctccgaggccaagctgt
ggcacagacagtggcatttccgatgccatggaagagctggaagaggcccaccagaagtgc
ccaccgtggtggtacaaatgttcccataaagtgctgatatggaactgctgcaccccgtgg
gtgaagttcaagaagatcatccacctgatcgtcatggaccccttcgtggacctgggcatc
accatctgcatcgtgctcaacaccctcttcatggccatggagcattacccgatgactgaa
cactttgacaatgtgctcaacgtgggcaacctggtgttcacaggcatcttcacggccgag
atggtgctgaagctcattgccttggacccctatgagtacttccaacagggctggaacatc
ttcgacagtatcatcgtcaccctcagcctggtggagctgggcctggccaacgtgcagggg
ctctcggttctccgctccttccggctgctgagggtcttcaagctagccaagtcatggccg
acgctgaacatgctcatcaagatcatcggcaactcggtgggggcgctgggcaacctgacg
ctggtgctggccatcattgtgttcatcttcgccgtggtgggcatgcagctgtttggcaag
agctacaaggagtgcgtgtgcaagatcgccgcggactgcagcctgccccgctggcacatg
cacgacttcttccactccttcctcatcgtcttccgcatcctctgcggggagtggatcgag
actatgtgggactgcatggaggtggctggtcaggccatgtgcctcactgtcttcctcatg
gtcatggtcatcggcaacctggtggtcttgaacctgttcttggccctgctgctcagctcc
ttcagtgctgacagcctggcggcctcggatgaggatggcgagatgaacaacctgcagatt
gccatcgctcgcatcacgtggggcatcggcttcgccaaagccttcctcgtggggctgctc
catggcaaagtcctgagccccaaggttatcatgctcagcctcggaagcatcggcgaggct
ggggaggctggcgaagctccggagagtgcccctgaggacgagaagaaggaacctccgccc
gaggaggatggcaaggacctcaagaaggacaaccacatcctgaaccacatgggcctggct
gacggccctccccccagcatcgagttggaccacctcaactttatcaacaacccctacctg
accatccacgtgcccatcgcctccgaggagtctgacctggagatgcccacagaggaggaa
accgacaccttctctgagcctgaggatgtcaagaagccgctgcagcccctggacgggaac
tcctccgtctgcagcactgccgactacaagccccccgaggacgaccccgaggagcaggcc
gaggacaaccccgatggggagcagccagaggagtgcttcaccgaggcctgcgtgcagcgc
tttcccttcctctacgtggacatctcccagggtcgagggaaaaagtggtggaccctccgc
agggcctgcttcaagatcgtcgagcacaactggttcgagaccttcattgtcttcatgatc
ctgctcagcagtggggccttggccttcgaggacatccacatcgagcagcggcgagtcatc
cgcaccatcctggagtacgccgacaaggtcttcacctacatcttcatcctggagatgctg
ctcaagtgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctcgac
ttcctcatcgtggacgtctccatcatcagcctggtggccaactggctgggctactcggag
ctgggacccatcaaatccctgcggacgctgagggccctgcgccccctgagggccttgtct
cgatttgagggcatgagggtggtggtgaatgccctgctgggagccatcccgtccatcatg
aacgtgctgcttgtctgcctcatcttctggctcatcttcagcatcatgggcgtcaaccta
tttgccggcaagttctactactgcatcaacaccaccacctccgagcggttcgaaatcacc
gaggtcaacaacaagtccgagtgcgaaagcctgatgcacacgggccaggtccgctggctc
aacatcaaggtcaactacgacaacgtgggtctgggctacctctccctcttgcaggtggcc
accttcaagggctggatggacatcatgtatgccgccgtggactcccgggagaaggaagag
cagccgatgtacgaggtgaacctctacatgtacctctatttcgtcatcttcatcatcttc
ggctccttcttcaccctcaacctcttcattggcgtcatcatcgacaacttcaaccagcag
aagaagaagtttggagggaaagacatcttcatgacagaggaacagaagaaatactataac
gccatgaagaagcttggctccaagaagcctcagaagccaattccccggccccagaacaag
atccagggcctggtgtacgacctggtgacaaagcaggcgttcgacatcacgatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggagacggacgaccagagccagctcaag
gtggacatcctgtacaacatcaacatggtcttcatcatcatcttcacgggcgagtgcgtg
ctcaagatgttggccctgcgccagtactacttcaccgtcggctggaatatcttcgacttc
gtggttgtcatcctgtccattgtgggcctggcgctctccgatctgatccagaaatacttc
gtgtcacccacgctgttccgtgtgatccgcctggcgcggatcgggcgggtcctgcggctg
atccgcggggccaagggcatccggacgctgctcttcgcgctcatgatgtcgctgcccgcc
ctcttcaacatcggcctcctcctcttcctggtcatgttcatctactccatcttcggcatg
tccaacttcgcctatgtcaagaaggaggcgggcatcgacgacatgtttaacttcgagacc
ttcggcaacagtatcatctgcctcttcgagatcaccacgtcggccggctgggacgggctc
ctcaaccccatcctcaacagcgggccccccgactgtgaccccgacctggaaaacccgggc
accagcgtccggggcgactgtggcaacccctccatcggcatctgcttcttctgcagctac
atcatcatttccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttc
aacgtggccacggaggagagcagcgagcctctcggggaggatgactttgagatgttctat
gagacgtgggagaagttcgaccccgacgccacgcagttcatcgactacagccgcctctct
gacttcgtggacaccctgcaggagccgctgaggatcgccaagcccaacaagatcaagctc
atcacgatggacctacccatggtgccgggggacaagatacactgcctggatatcctcttt
gccctgaccaaagaggtcctgggcgactccggggagatggatgccctcaaggagaccatg
gaggagaagttcatggctgccaacccctccaaggtctcctacgagcccatcaccaccaca
ctcaagaggaagcatgaggaagtgtgcgccatcaagatccagagggcctaccgccggcat
ctgctgcagcgctccgtgaagcaggcctcctacatgtaccgccacaaccatgacggcggt
ggggatggggcccccgagaaggaggggctgatcgccgacaccatgagcaagatgtacggc
cccgacaacgggaacagcggtgtgccgagcaaagaggaggagaggggctccacaggggac
cccggacctgccatggggctcaggcccgttagaccctccgacgcacccctccctcctgcc
ccgcccccggggcagacggtgcgcccaggggtcaaagagtctctcgtctag
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