Cervus canadensis (wapiti): 122442423 Help Entry 122442423         CDS       T07554                                  Symbol TRAF2 Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism ccad  Cervus canadensis (wapiti) Pathway ccad04010   MAPK signaling pathway ccad04064   NF-kappa B signaling pathway ccad04071   Sphingolipid signaling pathway ccad04137   Mitophagy - animal ccad04141   Protein processing in endoplasmic reticulum ccad04210   Apoptosis ccad04217   Necroptosis ccad04380   Osteoclast differentiation ccad04621   NOD-like receptor signaling pathway ccad04622   RIG-I-like receptor signaling pathway ccad04657   IL-17 signaling pathway ccad04668   TNF signaling pathway ccad04920   Adipocytokine signaling pathway ccad04932   Non-alcoholic fatty liver disease ccad05010   Alzheimer disease ccad05014   Amyotrophic lateral sclerosis ccad05016   Huntington disease ccad05017   Spinocerebellar ataxia ccad05022   Pathways of neurodegeneration - multiple diseases ccad05132   Salmonella infection ccad05135   Yersinia infection ccad05160   Hepatitis C ccad05163   Human cytomegalovirus infection ccad05167   Kaposi sarcoma-associated herpesvirus infection ccad05168   Herpes simplex virus 1 infection ccad05169   Epstein-Barr virus infection ccad05170   Human immunodeficiency virus 1 infection ccad05200   Pathways in cancer ccad05203   Viral carcinogenesis ccad05222   Small cell lung cancer ccad05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:ccad00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     122442423 (TRAF2)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     122442423 (TRAF2)    04064 NF-kappa B signaling pathway     122442423 (TRAF2)    04668 TNF signaling pathway     122442423 (TRAF2)    04071 Sphingolipid signaling pathway     122442423 (TRAF2)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     122442423 (TRAF2)   09143 Cell growth and death    04210 Apoptosis     122442423 (TRAF2)    04217 Necroptosis     122442423 (TRAF2)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     122442423 (TRAF2)    04622 RIG-I-like receptor signaling pathway     122442423 (TRAF2)    04657 IL-17 signaling pathway     122442423 (TRAF2)   09152 Endocrine system    04920 Adipocytokine signaling pathway     122442423 (TRAF2)   09158 Development and regeneration    04380 Osteoclast differentiation     122442423 (TRAF2)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     122442423 (TRAF2)    05203 Viral carcinogenesis     122442423 (TRAF2)   09162 Cancer: specific types    05222 Small cell lung cancer     122442423 (TRAF2)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     122442423 (TRAF2)    05160 Hepatitis C     122442423 (TRAF2)    05168 Herpes simplex virus 1 infection     122442423 (TRAF2)    05163 Human cytomegalovirus infection     122442423 (TRAF2)    05167 Kaposi sarcoma-associated herpesvirus infection     122442423 (TRAF2)    05169 Epstein-Barr virus infection     122442423 (TRAF2)   09171 Infectious disease: bacterial    05132 Salmonella infection     122442423 (TRAF2)    05135 Yersinia infection     122442423 (TRAF2)   09164 Neurodegenerative disease    05010 Alzheimer disease     122442423 (TRAF2)    05014 Amyotrophic lateral sclerosis     122442423 (TRAF2)    05016 Huntington disease     122442423 (TRAF2)    05017 Spinocerebellar ataxia     122442423 (TRAF2)    05022 Pathways of neurodegeneration - multiple diseases     122442423 (TRAF2)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     122442423 (TRAF2)   09167 Endocrine and metabolic disease    04932 Non-alcoholic fatty liver disease     122442423 (TRAF2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccad03019]     122442423 (TRAF2)    04121 Ubiquitin system [BR:ccad04121]     122442423 (TRAF2) Enzymes [BR:ccad01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      122442423 (TRAF2) Messenger RNA biogenesis [BR:ccad03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      122442423 (TRAF2) Ubiquitin system [BR:ccad04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     122442423 (TRAF2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-RING_6 zf-C3HC4_4 zf-RING_4 Gmx_para_CXXCG Exonuc_VII_L Motif Other DBs NCBI-GeneID:  122442423 NCBI-ProteinID:  XP_043326180 LinkDB All DBs Position 5:complement(101118208..101137328) Genome browser AA seq 516 aa AA seqDB search MAAASVTPPSSLDLLQPGFSKTLLGTKLEDKYLCSACRNVLRRPFQAQCGHRYCSFCLSS ILSSGPQSCAACVQEGIYEEGVSILESSSAFPDNAARREVESLPAVCPSEGCSWKGTLKE YESCHEGHCPFLLTECPACKGLVRLGEKEHHLEHECPERSLSCRHCRAPCCPADMKAHHQ ICPKFPLTCDGCGKKKIAREKFQDHVRTCGRCRVPCRFHAVGCPEMVESEKQQEHEAQRL REHLALLLGVLLEAGRPPGDGRPLLGQGEGAWEAGTPSRAAELLQRCEALERKTATFENI VCVLNREVERVAVTAEACGRQHRLDQDRIEALSNKVQQLERSIGLKDLAMADLEQKVLEM EASTFDGVFIWKISDFSRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGT HLSLFFVLMRGPHDALLRWPFNQKVTLMLLDQNHREHVIDAFRPDVTSSSFQRPVSDMNI ASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL NT seq 1551 nt NT seq  +upstreamnt  +downstreamnt atggctgcagccagcgtgacccctcccagctccctggacctgctgcagcccggcttctcc aagaccctcctggggaccaagctcgaggacaagtacctgtgctcggcctgcaggaacgtg ctccgcaggcccttccaggcgcagtgtggccaccgctactgctccttctgcctgagcagc atcctgagctccgggccccagagctgcgccgcctgcgtgcaggagggcatttacgaggag ggcgtctcgatcctggagagcagctcggcgttcccggacaatgctgcccgcagggaggtg gagagcctgccggcagtctgtcccagcgagggctgctcctggaaggggaccctgaaggag tacgagagctgccacgagggacactgcccattcctgctgaccgagtgcccggcgtgcaaa ggcctcgtgcgcctcggcgagaaggagcaccacctggagcacgaatgcccggagcggagc ctcagctgccggcactgcagggcgccctgctgcccagccgacatgaaggcacaccaccag atctgccccaagttccccctgacgtgcgacggctgcggcaagaagaagatcgcccgggag aagtttcaggaccacgtccggacgtgtggcagatgtcgagtcccgtgccgattccacgcc gtcggctgccctgagatggtggagagcgagaagcagcaggagcacgaggcgcagcggctc cgggagcacctggccctgctgctgggcgtcctgctggaggccgggcggcccccgggggac ggccgcccgctgctcggccagggcgagggcgcctgggaggccggcacaccctccagggca gcggagctgctacagaggtgcgaggccctggagcggaagacggccacctttgagaacatc gtctgtgtgctgaaccgggaggtggagcgggtggccgtgacggccgaggcctgcggccgg cagcaccggctggaccaagacaggatcgaggccctgagcaacaaggtgcagcagctggag aggagcatcggcctgaaggacctggccatggccgacctggagcagaaggtcctggagatg gaggcgtccacctttgatggcgtgttcatctggaagatctcggacttctccaggaagcgg caggaagccgtggccggccgcacgcccgccatcttctccccagccttctacaccagcagg tacggctacaagatgtgcctgcgcgcctacctcaacggggacggcaccgggcgcggcacg cacctgtccctcttcttcgtgctgatgcgcggcccgcacgacgccctcctgcgctggccc ttcaaccagaaggtgaccctgatgctgctggaccagaaccaccgcgagcacgtgattgac gccttcaggcccgacgtgacctcgtcgtccttccagaggccggtcagcgacatgaacatc gccagcggctgcccgctcttctgccccgtctccaagatggaggccaagaactcctatgtg cgtgacgacgccatcttcatcaaagccatcgtggacctgacggggctctag

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