Cervus canadensis (wapiti): 122443364 Help Entry 122443364         CDS       T07554                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 isoform X1   KO K16857   thrombospondin 1 Organism ccad  Cervus canadensis (wapiti) Pathway ccad04015   Rap1 signaling pathway ccad04115   p53 signaling pathway ccad04145   Phagosome ccad04148   Efferocytosis ccad04151   PI3K-Akt signaling pathway ccad04350   TGF-beta signaling pathway ccad04510   Focal adhesion ccad04512   ECM-receptor interaction ccad04820   Cytoskeleton in muscle cells ccad05144   Malaria ccad05165   Human papillomavirus infection ccad05205   Proteoglycans in cancer ccad05206   MicroRNAs in cancer ccad05219   Bladder cancer Brite KEGG Orthology (KO) [BR:ccad00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     122443364 (THBS1)    04350 TGF-beta signaling pathway     122443364 (THBS1)    04151 PI3K-Akt signaling pathway     122443364 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122443364 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     122443364 (THBS1)    04148 Efferocytosis     122443364 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     122443364 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     122443364 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     122443364 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     122443364 (THBS1)    05205 Proteoglycans in cancer     122443364 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     122443364 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     122443364 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     122443364 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccad04131]     122443364 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccad00536]     122443364 (THBS1) Membrane trafficking [BR:ccad04131]  Endocytosis   Phagocytosis    Opsonins     122443364 (THBS1) Glycosaminoglycan binding proteins [BR:ccad00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122443364 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS EGF_CA Laminin_G_3 TSP1_CCN Laminin_G_2 EGF Motif Other DBs NCBI-GeneID:  122443364 NCBI-ProteinID:  XP_043327363 LinkDB All DBs Position 6:32287278..32303178 Genome browser AA seq 1171 aa AA seqDB search MGLAWGLAVLLLSHVCGSSRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDKKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAVERKDHSGQLFSVV SNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKGITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTSVFL TLDNNVVNGSSPAIRTDYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELANELRRPPLCYHNGVQYRTGDEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPASDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQ TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGKAR ETKACQKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTENQ ICNKQDCPIDGCLSNPCFAGVQCTSYPDGSWKCGACPPGYSGDGVACKDVDECKEVPDAC FNHNGEHRCENTDPGYNCLPCPPRFTGSQPFGRGVEHATANKQVCKPRNPCTDGTHDCNK NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCP NLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY NHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQKDTDMDGVGDQCDNCPLE HNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDQDKVPDIDDICPENVDISETDFRR FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIY DKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcgctgtcctgctcctgtcgcacgtctgcggctccagccgc attccagagtctgggggagacaacagtgtgtttgacatctttgaactcaccggagctgcc cgcaagggctctgggcgccgactggtgaagggtcctgacccttctagcccagctttccgc atcgaggatgccaacctgatcccccctgtgcctgacaaaaagttccaagacctagtggat gctgtgcgggcggagaaaggtttcctcctcctggcctccttgaggcaaatgaagaagacc cgaggcaccctgctggccgtggagcggaaagaccactccggccagctcttcagcgtggtc tccaatggcaaggcgggcaccctggacctgagcctgaccgtgcaggggaagcaacatgtg gtgtcggtggaagaagcactcctggccactggccagtggaagggcatcaccctgtttgtg caggaggatagggcccagctgtacatcgactgtgagaagatggagaatgccgagctggat gtccccatccagagcatcttcaccagggacctggccagcatcgccagactccgcattgcc aaaggaggtgtcaatgacaatttccagggggtgctgcagaatgtaaggttcgtctttgga accacaccagaagacatcctcaggaacaaaggctgctccagctctaccagcgtctttctc accctcgacaacaacgtggtgaatgggtccagccctgccatccgcaccgactacattggc cacaaaacaaaggacctgcaggccatctgtggcatctcatgtgacgagctgtccagcatg gtcctggagctcaggggtctgcgaaccattgtgaccacgctgcaggacagtatccgcaaa gtgaccgaagagaacaaagagctggccaacgagctgaggaggcccccactctgctaccac aacggggtccagtacaggacgggtgatgagtggacggtggacagctgcaccgagtgtcgc tgccagaactcggttaccatctgcaaaaaagtgtcctgtcccatcatgccctgctccaac gccacagttcctgatggagaatgctgcccgcggtgctggccagccagcgactctgcagac gatggctggtccccgtggtctgagtggacctcttgctctgtgacctgtggcaatggaatc cagcagcgtggccgctcctgcgacagcctcaacaacagatgcgagggctcctctgtgcag acacggacctgccacatccaggaatgtgacaagagatttaaacaggatggcggctggagc cactggtccccctggtcgtcttgttctgtaacatgtggagacggtgtgatcacaaggatc cggctctgcaactcccccagcccccagatgaatgggaagccatgtgagggcaaagcccgg gagaccaaagcctgccagaaagacgcctgccccatcaatggaggctggggaccctggtca ccatgggacatctgttctgtcacctgtggaggaggggtacagaaacgtagccggctctgc aacaaccccacaccccagtttggaggcaaggactgcattggtgatgtgacagaaaaccag atctgcaacaagcaggactgtcccattgatggatgcctgtccaatccctgctttgctggt gtccagtgtaccagctaccctgatggcagctggaagtgtggtgcctgtcccccgggctac agtggagacggcgtcgcgtgcaaagatgttgatgagtgcaaagaagtccctgatgcctgc ttcaaccacaatggagagcacaggtgtgagaacacagaccctggctacaactgcctgccc tgcccaccgcgcttcactggctcgcagcccttcggccggggtgtggaacacgccaccgcc aacaaacaggtatgcaagccccgaaacccctgcacagacgggacacacgactgcaacaag aacgccaagtgcaactacctgggccactacagcgaccccatgtaccgctgcgagtgcaag cctggctacgccggcaacggcatcatctgtggggaggacacggacctggatggctggccc aacgaggacctggtgtgcgtggccaatgcaacttaccactgcaaaaaggataattgcccc aaccttcccaactcaggacaggaagactatgacaaggatggaatcggcgatgcctgtgat gatgatgatgacaatgacaagattccagatgacagggacaactgtccattccattacaac ccagctcagtacgactatgacagagatgacgtgggagaccgctgtgacaactgcccctac aaccacaacccagaccaggctgacacagataacaatggggaaggagacgcctgcgcagct gacattgatggggacggtatcctcaatgaacgggacaactgccagtatgtctacaatgtg gaccagaaagacactgacatggatggggttggtgatcagtgtgacaactgccccctggaa cacaatccagaccagcttgactctgactcagaccgcattggagacacctgtgacaacaat caggatattgatgaagacggccaccagaacaacctggacaactgtccctacgtgcccaat gccaaccaggctgaccatgacaaggatggcaaaggagatgcctgcgaccatgatgatgac aatgatggcattcctgatgaccgggacaactgcaggctggtgcccaatcctgaccagaag gactctgatggtgatggtcgaggtgatgcttgcaaagatgattttgaccaggacaaggtg ccagatattgatgacatctgtcccgaaaatgttgatatcagtgagactgatttccgccga ttccagatgattcctctagatcccaaagggacatcccagaacgaccctaactgggttgta cgccatcagggtaaagaactcgtccagactgtcaactgtgaccctggacttgctgtaggt tatgacgaatttaatgctgtggacttcagcggcaccttcttcatcaacactgagagggat gacgactatgccggctttgtgtttggctaccagtccagcagccgcttctatgttgtgatg tggaagcaagtcactcaatcctactgggacaccaaccccacgagggctcagggatactct ggactttccgtgaaggttgtgaactccaccacggggcctggcgagcacctgcggaatgcc ctgtggcacacaggaaacacccctggccaggtgcgcacactgtggcatgaccctcgtcac attggctggaaagatttcactgcctacagatggcgtctgagccacaggccaaagacaggt ttcatcagagtggtgatgtatgaagggaagaagatcatggctgactcaggacccatctat gacaaaacctatgctggtggcaggctaggcttgttcgtcttctctcaagaaatggtgttc ttctccgacctgaaatatgaatgcagagattcctaa

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