KEGG   Cervus canadensis (wapiti): 122445923
Entry
122445923         CDS       T07554                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122445923 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccad03041]
    122445923 (SMNDC1)
Spliceosome [BR:ccad03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122445923 (SMNDC1)
 Complex B
    122445923 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122445923 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 122445923
NCBI-ProteinID: XP_043331408
LinkDB
Position
8:20551637..20562728
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDNFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagctggcaagctacaaagctcaactccagcaagttgag
gctgcactgtctggaaatggagaaaatgaagatttactaaaattaaagaaagatttacaa
gaggttattgaactaaccaaagaccttctatcaactcagccttctgaaactctggcaagt
tcagacaactttgcttctactcagcccactcattcatggaaagtgggagacaagtgtatg
gcaatctggagtgaagatggacagtgttacgaagcggagattgaggagatagacgaagaa
aacggcaccgctgcgatcactttcgctggctatggcaatgctgaggtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgaacaagaaagagaggaccagaaggtgaaatggcaacag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcacctgagagcgtcactggcaaagttggagtgggaacttgtggaatcgctgataaacct
atgacacagtatcaggatacctccaaatacaatgttcggcatttgatgccacaatag

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