Cervus canadensis (wapiti): 122446621
Help
Entry
122446621 CDS
T07554
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad00900
Terpenoid backbone biosynthesis
ccad01100
Metabolic pathways
Module
ccad_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122446621 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccad01006
]
122446621 (GGPS1)
Enzymes [BR:
ccad01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122446621 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122446621 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
122446621 (GGPS1)
Prenyltransferases [BR:
ccad01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122446621 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
122446621
NCBI-ProteinID:
XP_043332994
LinkDB
All DBs
Position
8:complement(85271291..85283572)
Genome browser
AA seq
300 aa
AA seq
DB search
MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVHYLENVGSFEYTRNTLKELESKAYKQIDARGGNPELVALIKHLSKMFKEENE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactcaagaaacggtccaacgaattcttctagaaccttacaagtacttactt
cagttaccaggtaaacaagtaagaaccaaactttcacaggcgtttaatcattggctaaaa
gttccagaagacaagctacagatcatcattgaagtgacagaaatgttgcataatgccagt
ttactcatcgatgatattgaagacaactcaaaactccgacgtggctttccagtggcacac
agtatctatggaattccatctgtcatcaattctgcaaattatgtatattttcttggccta
gagaaagtcttaaccctcgatcacccggatgcagtaaagctctttacccgccagctttta
gaactccatcagggacaaggcctagatatctactggagggataattacacttgtcccact
gaagaagaatataaagcaatggtgctgcaaaagacaggtggactatttggattagcagta
ggtctcatgcagttgttctctgattacaaagaagatttaaaaccactacttgatacactt
gggctctttttccaaatcagggatgattacgctaatctacactccaaagaatacagtgaa
aacaaaagcttttgtgaagatctaacagagggaaagttctcattccctactattcatgct
atctggtcgaggccggaaagcacccaggtgcagaatatcttgcgccagagaaccgaaaac
atagatattaaaaaatactgtgtacattaccttgagaatgtaggttccttcgaatacact
cggaatactcttaaagagcttgaatctaaagcctataaacaaattgatgctcgtggtggg
aaccccgagctagtagctctaataaaacacttgagtaaaatgttcaaagaagagaatgag
taa
DBGET
integrated database retrieval system
