Cervus canadensis (wapiti): 122449996
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Entry
122449996 CDS
T07554
Symbol
MMP13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04657
IL-17 signaling pathway
ccad04926
Relaxin signaling pathway
ccad04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
122449996 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
122449996 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
122449996 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccad01002
]
122449996 (MMP13)
Peptidases and inhibitors [BR:
ccad01002
]
Metallo peptidases
Family M10
122449996 (MMP13)
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
122449996
NCBI-ProteinID:
XP_043338072
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All DBs
Position
11:4282754..4294515
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AA seq
471 aa
AA seq
DB search
MHPRVLAGFLFFSWTACWSLPLPGDGDSEDLSEEDFQFAENYLKSYYYPQNPAGILKKSA
ASSVIDRLREMQSFFGLEVTGRLDDNTLDIMKKPRCGVPDVGEYNVFPRTLKWSKMNLTY
RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDG
PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALM
FPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNSKHPKTPDKCDPSLSLDAITSLRGET
LIFKDRFFWRLHPQQVEAELFLTKSFWPELPNRIDAAYEHPSRDLIFIFRGRKFWALSGY
DILEDYPKKISELGFPKDVKKISAALHFEDSGKTLFFSENQVWSYDDTNHVMDKDYPRLI
EEVFPGIGDKVDAVYQKNGYIYFFNGPIQFEYSIWSNRIVRVMPTNSLLWC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcacccaagggtcctggctggcttcctcttcttcagctggacggcttgttggtccctg
ccccttcccggtgatggagattctgaagacttgtctgaggaagacttccagtttgcagag
aactacctgaaatcgtactactatcctcagaatcctgctggaatcctgaagaaaagtgca
gcaagctctgtgattgacaggcttagagaaatgcagtcatttttcggcttagaggtgact
ggcagacttgatgataacaccttagatatcatgaaaaaaccaagatgtggggtccctgat
gtgggtgaatacaatgtttttcctcgaactctcaagtggtccaaaatgaacttaacctac
agaattgtgaattatacacctgatctgactcattctgaagtggaaaaggccttcagaaaa
gccttcaaggtgtggtctgatgtgacacctctgaattttaccagaattcacaatggcact
gctgatatcatgatctcttttggaacgaaagagcatggtgacttctacccatttgacgga
ccctctggtctgctggctcatgctttccctcctggaccaaattatggaggagatgctcat
tttgatgatgatgaaacctggacaagtagttccaaaggctacaacttgtttcttgttgct
gcccatgagtttggccattccttaggtctggaccactccaaggacccaggagcactcatg
tttcccatctacacctacactggcaaaagccactttatgcttcctgatgatgatgtccaa
gggattcagtctctctatggtccaggagatgaagaccccaactctaaacatccgaaaaca
ccggacaaatgtgacccttccttatcccttgatgccattaccagtctccgtggagaaaca
ctgatcttcaaagacagattcttctggcggctgcatcctcagcaggttgaagcagagctg
tttttaacaaaatcgttttggccagaacttcccaaccgtattgatgccgcctacgagcac
ccttcccgtgaccttatcttcatctttagaggcagaaaattttgggcacttagtggttat
gatattctggaagattatcccaaaaaaatatctgaactgggatttccaaaagacgttaaa
aaaatcagtgcagcccttcactttgaggattcagggaagacgctcttcttctcagaaaac
caagtctggagctatgatgacactaaccatgtgatggataaagactaccccagactcatt
gaagaggtcttcccaggaattggtgataaagtagatgctgtctaccagaaaaatggttat
atttattttttcaatggacccatacagtttgaatacagcatctggagtaaccgtattgtt
cgagtcatgccaacaaattccttattgtggtgttaa
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