Cervus canadensis (wapiti): 122450041
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Entry
122450041 CDS
T07554
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04022
cGMP-PKG signaling pathway
ccad04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
122450041 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122450041 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122450041 (TRPC6)
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122450041 (TRPC6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
122450041
NCBI-ProteinID:
XP_043338104
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All DBs
Position
11:5869421..6019757
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AA seq
933 aa
AA seq
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MNQSPAAFGPRRGGSPAVAVRAGARRNESQDYLLMDSELGDDAQPPLPAYGYYPCLRGTD
NRLTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEEC
LSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAIL
SHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRK
GARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELS
NELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEIRHSGGDHGR
PNLSRLKLAIKYDVKKFVAHPNCQQQLLSIWYENLSGLRQQTVAVKFLVVLAVAVGLPFL
ALLYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKILPNETSTDHA
KQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAAS
FIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYA
IAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYI
GAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLL
NMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLRL
KKWISELFQGHKKGFQEQEDAEMNKRNEEKKFGILGSHEDLSKLSLDRKQFAHSKQSSIR
SSEDFQLNSFTNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYEL
LEEKTQNSEDLAELIRKLGEKLSMESNQEESNR
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaagcccggccgcgttcgggccccggaggggcggctctcccgccgtggcggtc
cgggctggcgcgcggcgcaacgagagccaagactacctgctcatggactcggagctggga
gacgacgcgcagcccccgctgcctgcctacggctactacccctgcctccggggcaccgac
aacagactgacccaccggcggcagacagttctccgtgagaaggggagacggttagctaac
cgaggaccagcgtacatgtttaatgaccactcaacaagcctgtctattgaggaggaacgc
tttttagatgcagctgagtatggcaatatcccagtggtaaggaagatgttggaagaatgc
ctctcactcaatgtcaattgtgtggattacatgggccagaatgccctgcagctagcagtg
gctaatgagcatctggaaattacagaacttcttctcaagaaagaaaatctctctcgtgtt
ggggatgccttgcttttagctattagtaaaggttatgttcggattgtggaagccattctc
agtcacccagcttttgctgaaggcaagcggttagcaaccagcccaagtcagtctgaactc
caacaagatgatttttatgcatatgatgaagacgggacacggttctcccatgatgtgacc
ccaatcattctggctgcccactgccaggaatatgaaattgtgcacaccctcttgcggaag
ggtgctcggatcgaacggcctcatgactatttctgcaagtgcagtgaatgcaaccagaaa
cagaagcatgactccttcagccactccagatctagaattaatgcctacaaaggcctggcg
agcccagcttacctgtcattgtctagcgaagatccagtcatgacagctttagagcttagc
aatgagctggcagtgctggccaacatagagaaggagttcaagaatgactacaaaaaactg
tcgatgcagtgcaaagatttcgttgttggactccttgatctgtgcagaaatactgaagaa
gtggaagccattctgaatggggatgttgaaatacgccacagtggtggagatcatggtcgt
cctaacctcagccgtttaaaacttgccattaagtatgatgtaaaaaaatttgtagcccac
ccgaactgccagcagcagctcctgtccatttggtacgagaacctgtctggcctgcggcag
cagaccgtggccgtcaagttcctggtggtcctcgccgtggccgtgggcctgcccttcctg
gccctgctttactggtttgccccctgcagcaagatggggaagataatgcgtggaccattc
atgaagtttgtagcacacgcagcctccttcaccattttcctgggactgctagtcatgaat
gcagctgacagattcgaaggcaccaaaatccttcctaatgaaaccagcacagatcatgca
aaacagctgttcaggatgaaaacatcctgcttctcatggatggagatgctcattatttcc
tgggtaataggcatgatatgggctgaatgtaaagaaatttggactcaaggccccaaggag
tacttgtttgagctgtggaatatgcttgactttggaatgctggcaatctttgcagcatca
ttcattgcaagattcatggcgttctggcatgcttccaaagcccagagcatcattgatgca
aatgatactttaaaggatttgacaaaagtcacactgggagacaatgtgaaatactacaat
ttggccaggataaagtgggacccctctgatcctcaaattatatctgaaggtctttatgca
attgctgtagttttaagtttctccagaatagcctacattttaccagcaaatgaaagcttt
ggacctctgcagatatcacttggaagaacagtaaaagatatcttcaagttcatggtcata
ttcatcatggtgtttgtggcctttatgattggaatgttcaacctctattcctactacatt
ggtgcgaagcaaaatgaagccttcacaacagtggaagagagttttaagacactgttttgg
gctatatttggactttctgaagtgaaatcagtggtcatcaactataatcacaaattcatt
gaaaacatcggttatgttctttatggagtctataatgttacgatggtcattgttttgcta
aatatgttaattgcaatgatcaacagttcattccaggaaattgaggatgatgctgatgtg
gaatggaaatttgcaagggccaagctttggttttcttactttgaggagggaagaactctt
cctgttcccttcaacctggtgccaagtccaaagtccctgttttatcttttattgaggctt
aaaaaatggatttctgaattgttccaaggccataaaaaaggtttccaggagcaggaggat
gcagaaatgaacaagagaaatgaagaaaagaaatttggaattttgggaagtcatgaagac
ctttcaaaattatcacttgacagaaaacagtttgcacatagtaaacaatcaagtataagg
agctcagaagatttccagttaaacagtttcactaatcctccaagacaatatcagaaaata
atgaagaggctcattaaaagatatgtattacaagcccagatagacaaggagagtgacgaa
gtgaacgaaggggaactgaaagaaattaaacaagacatctcaagcctccgctatgaactt
cttgaagaaaaaactcagaattcagaagacctggcagaacttattagaaaacttggggag
aaattatcaatggagtcaaatcaagaggaaagcaatagataa
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