Cyanistes caeruleus (blue tit): 111930312 Help Entry 111930312         CDS       T05602                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae04115   p53 signaling pathway ccae04145   Phagosome ccae04148   Efferocytosis ccae04350   TGF-beta signaling pathway ccae04510   Focal adhesion ccae04512   ECM-receptor interaction ccae04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ccae00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     111930312 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111930312 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     111930312 (THBS1)    04148 Efferocytosis     111930312 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     111930312 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     111930312 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     111930312 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccae04131]     111930312 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccae00536]     111930312 (THBS1) Membrane trafficking [BR:ccae04131]  Endocytosis   Phagocytosis    Opsonins     111930312 (THBS1) Glycosaminoglycan binding proteins [BR:ccae00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111930312 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  111930312 NCBI-ProteinID:  XP_023784095 LinkDB All DBs Position 5 AA seq 1177 aa AA seqDB search MGPATALCLLLLVFGGSETKRTAESRNDDNSVFDLFELIGFMRKGAGRRAPGVYLVKGPE SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQSKKSRGTLLSVEQKDGS GHVFSLVSNGKAGSLDLSLSVDGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK MENAELDIPIQSIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTL QDRVRKVTEENEIIAKVVQITPGACIHNGVLHKNKEEWTIDSCTECTCQNSATICRKVSC PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP CEGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG EARGTQVCNKQDCPIDGCLSNPCFAGATCTSAPDGSWKCGACPAGYHGDGIHCQDIDECK EVPDACFIFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMTNKQVCKPRNPCTDG THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC KKDNCPNLPNSGQEDYDKDGIGDACDDDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR CDNCPYNHNPDQTDTDNNGEGDACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC DNCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEIS ETDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atggggccagcgactgctctctgcctccttctcctcgtgttcggcggctccgagaccaag cgaactgcagagtccaggaatgatgataacagtgtcttcgatctctttgaactcattggc ttcatgcggaagggagccgggcgccgggcccccggggtgtacctggtgaagggaccagaa tcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactcc aagttccaagacttattagatgccatccatgctgagaagggcttcattctcctggccact ctccggcagtccaagaaaagcagaggcacactgctctccgtggaacagaaagatggctct ggtcatgtcttcagtctagtatctaatggcaaggcaggctccctggacctgagcctttct gttgatggcaagcagcagttagtgtcagtagaggatgtcttgctagctacaggacattgg aagaatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaa atggagaatgctgaactggacatccccatccagagcatcttcactagggacctggccagc agtgccaggctccgtattgccaaagggggagtcaatgacaacttccagggtctgctgcag aatgtgcggtttgtgtttggaacaactctggaaactatcctgcggaacaaaggctgctcc agctccactagtgcaatcattactttggacaaccccatcaatggttccagcccagctatc cgcactaattacataggccataaaacaaaggacatccaagcagtctgtggattttcctgt gatgaattgacaaatatgtttgtggaactgcaagggctacggtccatggttacaacactt caagacagagttcgcaaagtgactgaagaaaatgaaatcattgccaaagtagtccagatc actcctggagcatgcattcataatggagtcttgcacaaaaataaagaggagtggactatt gacagctgcactgaatgtacttgccagaactctgccactatatgccggaaagtgtcctgt cctctcatgccttgttccaatgccaccgtgcctgacggggagtgctgccctcggtgctgg cctagcgactatgcagatgatggatggtctccttggtctgaatggacctcgtgttctgtg acctgtggtaatgggattcagcagagaggccgctcctgtgacagcctcaataaccgctgt gaaggctcctctgtacagactcggacttgccaccttcaggagtgtgataagagatttaaa caggatggtggctggagtcactggtcgccatggtcatcatgttccgtcacttgtggcacg ggcatcatcactagaattcggctttgcaactctccagtaccacagctgaatggcaaaccc tgtgagggtgaagcaagagaaaacaaagcctgccagaaagatccttgcccaattaatggc aactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcag aagcgaagccgtctctgcaataatcccgagcctcagtatggtgggaagacttgtgtaggt gaagctagagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctgtct aatccctgctttgcgggggctacgtgcaccagtgcccctgatggttcctggaagtgtggt gcctgtcctgctggctaccacggtgatggtattcactgccaagatattgatgagtgcaaa gaggttcctgatgcctgctttatcttcaacggagtgcacaggtgtgagaatactgaacct gggtacaactgtctgccttgtccaccacgcttcactggaacacagccgttcggccgcagt gttgaggatgccatgacaaacaaacaggtctgcaagccacgtaatccatgcacagatgga acacatgactgcaacaagaatgccaaatgcaattaccttggccacttcagtgatcccatg tatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatact gacttggatggatggccaaatgagaacctggtttgtgttgccaatgctacttaccactgt aaaaaggataactgccctaatctacctaactcagggcaggaagactatgataaggatggg attggtgatgcctgtgacgatgatgatgatgatgatggcattcctgatgaccgggacaac tgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccgc tgtgacaactgtccctacaatcacaaccctgatcaaactgacactgacaacaatggagaa ggagatgcatgtgcaatagatattgatggagatggggtgcttaatgaaagggacaactgc cagtatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgt gataactgtccactggaacataaccctgaccaggaagatactgattctgatcgcataggt gatcagtgtgacaacaaccaggacatagatgaggatggtcatcaaaataaccttgataac tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc tgtgaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagattggtt gccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgac tttgaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggaaattagt gagactgatttccgaaaatttcagatgattcccctggatcccaaaggaacatcccaaaat gatccaaactgggttgttcgtcaccagggtaaagaactggttcaaacagtcaactgtgac cctggccttgcagttggttttgatgaattcaatgctgtggacttcagtggtaccttcttt atcaatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagcagt cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacc aaagctcaaggctattcaggtctctccatcaaagttgtgaattccaccactggtcctgga gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactctg tggcatgatccccgtcacataggctggaaggacttcactgcatacagatggcgacttagc catagaccaaagaccggctacatcagggttgtaatgtatgaagggaagaaaatcatggca gactcaggaccaatctacgataaaacctatgctggtggtcggctaggattatttgtcttc tctcaagaaatggtgttcttctcagaccttaaatatgaatgcagagattcataa

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