Cyanistes caeruleus (blue tit): 111933973
Help
Entry
111933973 CDS
T05602
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04115
p53 signaling pathway
ccae04210
Apoptosis
ccae05164
Influenza A
ccae05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111933973 (APAF1)
04115 p53 signaling pathway
111933973 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
111933973 (APAF1)
05168 Herpes simplex virus 1 infection
111933973 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
NB-ARC
APAF1_C
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
APAF-1-like_WHD
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
CARD
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_HPS5
RMC1_N
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
PEP5_VPS11_N
WD40_RFWD3
CARD_2
Beta-prop_NUP159_NUP214
WD40_like
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
WDR54
AAA_16
DUF2415
AAA_22
Dark_WHD
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
111933973
NCBI-ProteinID:
XP_023789568
UniProt:
A0A8C0UPF0
LinkDB
All DBs
Position
1
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNRQALENDIKTSYIMDHMIADEVLTLQEEERVKQQNTQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHESTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGIKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANCLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLDDNYKDYYKDLSVLPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAKMQQELHDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CAFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSSD
TFIKIWDLNKKYCRNTMIGHENSVNHCRFSPDDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFKNADEQSDDVEVLVKCCSWSRNGNMLLVVAKNKLLLFDISTCGLLTQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTAA
QESPISCCCLSEDLKFAAFGQENGTIKVLQLSDGKVLKSWEAYRTSVQHCRFTPDCQTLI
SSAHDSVIQVWNWQLSECVFLRGHKEAIKDFRLLEDSKLLSWSFDGTVKVWNVTTGNPEK
DFACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSALHELKGHEACVRCCTFSPNN
KLLATGDDKGEIRIWDVLTGALLHSCSPVTVDEGEPTHGGWVTDLSFSPDNKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaaagtagaaactatttgctgatgaatcgtcaagcactggaaaatgacatc
aagacttcttatatcatggatcatatgattgctgatgaagtgctaacgttacaggaggag
gagagagtgaagcagcagaatacacagaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgctccatgaagggtac
agagatcttgctgcacttctccaggatggcatccctgctgtctcatctggtaacagaaag
agttcaatggatggaatgacttcttacgtgaagaccattctctgcgaagggggtgtgcca
cagagaccagttgtgtttgtcactcgaccaaagctcgtagatgctattaaaaagaaactg
tactgcttgggaagtgatccaggctgggtcacagtttatggaatggcaggctgtgggaag
actgttttgacagcagaagctttaagggatcctcagctcttggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctcctcataaaacttcag
aatctctgtagtaggttggaacatgagtccactctttcacaaagaccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgttgcgcaaataccccaggtctcttttg
gtcctggatgacatttgggattcctgggtgttaaaagcatttgataatcaatgtcaggta
ctcatcacgagcagggacaggagtgtaacagatgctgtggctggcattaaatatgaggtt
catgtggaaagtgggctagcacatgagaaaggattggagattttatccctatttgtgaat
atgaaaatatcagagcttccagaacaagctaactgtcttgtaagagaatgcaaaggttct
cctcttgtgatatccttgataggtgcgttactacgagacttccctagccgctgggagtac
tatctcaggcagctgcagaataagcagtttaaaagaataagaaaatcttcctcttatgat
tacgaagcccttgatgaagcaatgtccataagtgttgagcaactggatgacaattacaaa
gactactataaagacctctctgtcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaggttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcggaatgggaagtcattccattattatttacatgatctt
cagcttgactttctcacagagaagaatcgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaggattgc
atgtattggtataacttcctagcatatcacatggcaggtgccaaaatgcagcaggagctc
catgatcttatgttttctttggattggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtagaatatagttcaatcctggatcaaaaggatagcacagtg
cgtgagaatttccaggaatttctgtctttaaatgggcacctccttggacggcagccgttt
cctgacatcattcagctgggtctttgtcagccagagacgtcagaggtgtatcaacaggcc
aagctgcatgcccaaagggaaacaggaacattttatttagagtggataaataaaaaatcc
ttgaaaaatctctaccgcctggttgttcgtccacacagagatgcagtttaccatgcctgc
ttttctaaggatagacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagacttctggagataaacgcccacgatgatgaaatactctgt
tgcgctttttctgcagatggtgaatttgtagcaacttgttcaagtgataaaaaagtcaag
gtctggaattcaagaacaggccagtgtaggtgtgtatacgaagaacactctgagcaggtc
aactgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctccagtgac
actttcatcaaaatttgggatttaaataaaaaatactgtagaaatacgatgataggtcat
gaaaattctgtcaatcactgcagattttcaccagatgatgaatatgttgctagctgttcg
accgatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttcttcaaaaatgcagatgagcaatcagatgatgtggaggttttagtaaaa
tgttgctcttggtccagaaatggtaacatgcttttggtggtagccaaaaacaagcttttg
ctttttgatatcagcacctgtggtttgttaactcaagtcattgtcagccatcacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tctgttgagctatggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgat
gaccagacaatacgcatctgggaaacaaagaaggtgtgcaagtcttctgatgctgtgctg
aaaagtgaactagatgttgtatttcacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaatacagacaatgttatcatgcagacagcagcc
caagagtctcccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttggg
caagagaatggaacaataaaggtactacagttgtcagatgggaaagttctgaagtcctgg
gaggcctacaggacatcggtgcagcattgtcgatttacacctgattgtcagactctcatc
tcaagtgctcatgattcagttatacaggtatggaattggcagttgagtgaatgtgtgttt
ctgagagggcacaaggaagcaatcaaggatttcagacttctggaagattcaaaacttctc
tcttggtcattcgatggaaccgttaaggtttggaatgtcactactggaaatccagaaaaa
gattttgcatgtcacggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgct
cttcatgaactgaaaggccatgaagcctgtgtgcggtgctgtactttctctcctaataac
aaactgttggccactggagatgacaaaggagaaataaggatttgggatgttttaactggt
gcattacttcactcctgctccccagttactgtagatgaaggagaaccaacacatgggggt
tgggtaacagacctctccttctctcctgacaataaaatgcttgtgtcatctggaggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aacctcaagtcaatacatgtgtcccctaatttcaaagtgtatgtgactgttgataatctt
ggtattctttacgtattacagaagttctga
DBGET
integrated database retrieval system
