Cyanistes caeruleus (blue tit): 111935616
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Entry
111935616 CDS
T05602
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111935616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
PDZ_6
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111935616
NCBI-ProteinID:
XP_023791854
LinkDB
All DBs
Position
13
AA seq
1542 aa
AA seq
DB search
MIVVENSKDNEENILQREVPLRQSRRRYRKINLRGERQTITDNVDSSSYMLLPADLTKMH
LTDNPHPQVMHVPSSQSGCSIASDSGSSSLSDIYQATESEMGDVDLTGLPEAPVDSEDEE
EEEDEDIDRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRREL
CSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISYPDGKSESLCMGNSFGITPSLEK
QYMNGVVRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRK
GHIVIKATPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLTSPLEVGNKLLEWFTVDSLRD
KVTRVVLLWVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMKGHLRLLNIACAAKAKWRQIT
LQKPSRDSPLFFSLLGGSDKGFGIFVETVEIGSKAAEAGLKRGDQIMEVNGQNFENITFV
KALEILKNNTHLSITVKTNIFVFKELLCRIGQEKNGIPHIPKIAEKKNNRYSIPDMPGDV
EQMFPREKGNKKMKANTVSGGRNRIRKILDKTRFSILPPKLFSDGSMSQSQDDSIVGTRQ
CRHSLAIMPIPGTLSSSSPDLLQPTTSILDFSNPSDIPDQVIRVFKADQQSCYIIISKDT
TAKEVVSHAVHEFNLTGAPETYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNGRYYLK
NNMETETLCSDEDAQELLRESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYIDDLYKL
DSKTGNAHLKQFEDVINQETFWVAMEILAEPNQLKRMKIIKHFIKIALHCRECKNFNSMF
AVISGLNLAPVARLRGTWEKLPSKYEKHLRDLQDLFDPSRNMAKYRNILSSQSMQPPIIP
LFPVVKKDITFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAVMFRQRKKRW
RSLGSLSQGSMNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNLSVETD
EEKIQILSLQCEPAYSTLTKNLSERRGGKSSEMSPVPMRSIGQTTKAHQHQQNRMSQVLQ
VPTVNLYPSRKKGLTKDHVTFSTGSPQKSLSLSEEVSTKKQTDDTMSMASSLHSSPPASP
QGSPRKVGNIQRSGNCSQMNLSGSSSSLASETSNKNSGQRSYGIGYALIPSTKSDNFSDS
SHSEISSRSSIVSNCSVDSMSAALQDERSLSQSLIVVDSGGAERKEHPQALTDYTQPCPG
WSITRPALIRGMAFTSSMSSEEISHEHITVEAADSGRGSWTSCSSSSHDNFQNIPNQKSW
DLLSSYRHTQLDGPIAEVDPTNCYSEEGYLYSEAFSKANRQSKASVELNQSRQSWASSSS
LSDTYETNYGTIKRRGLENSTAEQTEVLDSKPGADTAYKTVTSSTEKGLIVYCVTSPKKD
DRYREPPPTPPGYMGISLADIKEGSPHHPHLKPPDYSVAVQRSKMLHSDLSRLAPAALGS
DPVACVSSRTPQWYGRQPSSPRVADLPDADSEEDEDEQVSAV
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggtggagaactctaaagacaatgaggaaaacatcttgcaaagagaagtccca
ctccggcagtcccgtcgcaggtataggaagatcaacctgaggggtgagcgtcagaccatc
acggacaatgtggattccagcagctacatgttgcttccagctgaccttaccaagatgcat
ctcaccgacaatcctcatcctcaggtgatgcatgtcccttcgagccagtcaggatgtagc
attgccagtgactctgggagcagcagcctgtctgatatttaccaggctacagaaagtgag
atgggagatgttgatttaacgggtcttccggaagcacctgtagactctgaagatgaagaa
gaggaggaggatgaagatattgacagaacatctgatccacttctagggcgagatgttgtc
cgagagtgccttgagaaagagcctgcagacaaaactgatgatgacatcgaacaattactg
gaattcatgcatcaactccctgcctttgcgaacatgaccatgtctgtgaggagagaactg
tgctcagtgatgatatttgaagttgtagagcaagcaggagccatcatacttgaagatggc
caggaacttgattcttggtatgttattttaaacggcacagtagaaatcagctatcctgat
gggaagagtgagagtctctgtatgggaaatagttttgggattactccctctctggagaaa
cagtacatgaatggcgtggtcagaaccaaagtagatgattgtcagtttgtgtgtatagcc
cagcaagactactggaggattctgaaccatgtggaaaaaaacactcataaagtggaggaa
gaaggagaaattgtgatggtaaaggagcacagggagctggatcgcagtggaaccagaaaa
ggacacatagttatcaaggcaacacccgagagactcatcatgcacttaatagaggagcat
tctattgtggatccaacctacattgaagattttcttttaacatacagaacatttctaaca
agtcccttggaagttggaaataaactcttggaatggttcacagtggacagcctcagggat
aaggttaccagagtagtgttactgtgggtgaacaatcattttaatgactttgaaggtgat
cctgccatgactcgattcctggaagaatttgaaaagaacttggaagatacgaaaatgaaa
ggccatctcagattgctgaatattgcctgtgctgccaaagcaaaatggagacaaatcacc
ctgcaaaaaccttccagagattctcccctgtttttcagccttcttggaggcagtgacaag
gggtttggtatttttgtagagactgtggagataggcagtaaagcagcagaagctggactt
aagcgtggtgaccagataatggaagtaaatggacagaattttgagaacattaccttcgta
aaagctctggaaatcttaaagaataacacacatctctccattactgtaaaaacaaacatt
tttgtgtttaaggagctgctctgcaggataggacaggagaagaatggaatcccacatatt
ccaaaaatagcagaaaagaaaaacaaccgttattctatcccagatatgcctggagatgtg
gaacagatgtttccccgtgaaaaaggaaacaagaaaatgaaagcaaacactgtatctggt
ggaagaaatagaatcaggaaaattttagacaagacccgtttcagtatcttgcctccaaaa
ctgttcagtgatggcagcatgagccagtcacaggatgacagcatcgtggggacacggcag
tgccggcacagcctcgccatcatgcccattccaggcaccctctcatccagtagccctgac
ctgctacagcccacaaccagcattctggatttctctaacccttcagatattccagatcaa
gtgatacgagttttcaaagcagatcagcagagctgttacatcatcatcagcaaagacact
acagcaaaggaggtggtgagtcatgctgtccatgaattcaacctgacaggagcccctgag
acctattccctgtgtgaggtgtccgtcagccctgagggtgtcatcaaacagaggaggctc
ccagatcagttctccaagctggctgacaggattcagctcaatggacggtattatctgaaa
aacaatatggaaacagagaccttatgctcagatgaggatgctcaagagctactccgagag
agccaaatttccctcctccagctgagcaccattgaagtggccactcagctttccatgcgg
gactttgaattattccgaaacatcgagccaacagaatacattgatgacctttacaagctg
gactccaaaacagggaatgctcacctgaaacagtttgaggatgtcataaatcaagagacc
ttctgggttgccatggaaattttagccgaacccaaccaactcaaaagaatgaagattatt
aagcatttcattaaaattgctctccactgtcgagaatgcaagaacttcaattccatgttt
gcagtgataagtgggttaaatcttgcaccggtggctcgtctcagaggcacttgggaaaag
ttacccagcaagtatgaaaagcacctcagagaccttcaagatctttttgatccatctcga
aacatggcaaaatatcgcaacatcctcagcagccagagcatgcagcctccaattatccca
cttttccctgttgtcaagaaagatattacatttctgcatgaaggcaacgattctaaagtg
gatggcctggtaaatttcgagaaactccggatgattgccaaagaaattcgccaagttgtc
cgaatgacctcggcaaacatggatccagctgtgatgttcagacaaaggaagaagaggtgg
agaagtttgggatctctaagccagggcagcatgaactcgaacatgctggatgtgcaggga
ggtgctcacaagaaacgtgcccgccgcagctcgctcctgaatgccaagaagctctatgag
gatgcacagatggcgaggaaggtgaagcagtacctgtccaacctcagtgtggagacagac
gaagaaaagatccaaatattgtcacttcagtgtgagcctgcatacagcactttgacaaaa
aatttaagtgagagaagaggagggaaatcctccgaaatgtctccagtgcccatgagatca
attggccaaaccacgaaagcccatcagcatcaacaaaacagaatgagtcaagttcttcag
gtcccaactgtgaatttgtaccccagcaggaaaaagggactgacaaaggatcatgtcaca
ttcagtacaggctctccacagaaatcattaagcttgtctgaggaagtaagtactaagaaa
caaacagatgacactatgtccatggcatcttctttgcactccagcccacctgcctctcct
cagggctccccacgcaaagttggcaacatccaaaggtctggtaactgcagtcagatgaat
ctctctggctcttcctcatcactggccagtgaaaccagcaacaagaacagtggacagcgc
agctatggaataggctatgccctcataccttccactaaatctgacaacttctcggactcc
agtcacagtgagatttcatcccggtccagcatcgtgagcaactgctctgtggactccatg
tcagcagcactgcaggacgagaggagtttgtcccagtccctcattgtggtggattcaggc
ggggcagagagaaaggagcatcctcaggcactgacagattacactcagccctgccccggc
tggtccatcactaggcctgctctgatcagagggatggcattcacgtcttccatgagcagc
gaggagatctcccatgagcacatcactgtagaggcagcagacagcggccggggaagctgg
acttcatgctcaagtagttctcatgacaatttccagaatatcccaaaccagaagagctgg
gatctcctcagttcttaccgtcacacccagctggatggacctatagctgaagtggatccc
acaaactgttactctgaggagggttatttgtattctgaagctttttccaaagccaacagg
cagtcgaaagccagcgtggagctcaatcagtctcggcagagctgggcatcctccagctcc
ctgtcagacacttacgagacaaactatgggacaattaagcggagggggctggagaactcc
acagcagagcagacggaggttttggactctaaaccaggtgctgatacagcttacaaaact
gttacttcaagtacagaaaaaggcctgatagtgtactgtgtcacctcacctaagaaggac
gataggtatagggagccaccgcccacccctccgggatatatggggatttctttagcggac
ataaaagaaggatcgccccaccacccacacctcaaacctccagactatagtgtggcagtg
cagaggtcaaaaatgctgcacagtgacctctctagacttgcaccagctgctctcggtagt
gacccggtggcctgtgtctcctcgaggacgcctcagtggtacggccggcagccgtccagc
cccagagtagcagacttgcctgacgcagatagtgaagaggatgaagatgaacaagtatca
gcagtttaa
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integrated database retrieval system
