Cyanistes caeruleus (blue tit): 111937595
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Entry
111937595 CDS
T05602
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae00514
Other types of O-glycan biosynthesis
ccae04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
111937595 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111937595 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccae01003
]
111937595 (RFNG)
Enzymes [BR:
ccae01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
111937595 (RFNG)
Glycosyltransferases [BR:
ccae01003
]
Glycan extension
O-Glycan
111937595 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
PPV_E1_N
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
111937595
NCBI-ProteinID:
XP_023794772
LinkDB
All DBs
Position
18
AA seq
546 aa
AA seq
DB search
MHWLHHSCIVPALACIPRKCEIDLKTTHRANNITTTPRDFLSPNGDSVEGITPGLTQADK
VVSELKSPAVLGRNRCDLLLEGVQYRPVTTEGAELDAELSLFLSSVPKASCPDRELLKLA
KGSLRKYLVSPTHSALLGLSPALQTLSFSSLGHLTVPSATTPALPTAHTARESNRSHCSG
QDATAARGRSAEHCSSRTVAEATQTRRNDERGPRASRKPFPSRRVRGEGRKAPPEAAVNL
RSQTPPPGGAGLAGSPQLARRGRLGAAGSSARESLELKDIFIAVKTTRKYHKSRLDLLLQ
TWISQARGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGQK
WFCHVDDDNYVNPRTLLHLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTTVKFWFA
TGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHS
HLENLQRLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTIWC
PAKKMS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcactggcttcatcacagctgcattgttccagcccttgcatgtattcccagaaaatgc
gagattgacttaaaaactactcacagagcaaataatataacaaccacgccccgagatttc
ctgagcccaaacggggactctgttgagggtatcacaccaggcctcacacaagctgataaa
gtggtgtctgagctgaagtctcctgctgtactcggcaggaacaggtgtgacctgttgctg
gagggggtgcagtacagacctgtcactactgaaggagctgagttggatgctgaactgtcc
ctcttcctctcctcagtccccaaagcctcgtgccctgacagagaattactgaaacttgca
aagggtagccttcggaagtacttagtgtcaccgacccactcggcgctcctggggctctcc
cctgcactgcagaccctcagtttctcctcattgggccatctcaccgtaccctccgccact
actccagccctgcctacggcacatacagcgcgggaatcaaacaggagccactgcagcggc
caggacgccacggctgccagaggacgctcagctgagcactgctcctcccgaacggtggcg
gaagcgacacagacccgacggaatgacgagcgagggcccagggccagccgaaagccgttc
ccttcccgtagagtccggggagaaggccgcaaggcgcccccggaggccgcggtaaacctg
aggtcccagaccccgccgccgggcggcgcaggcctcgcgggtagcccgcagctggcgcgg
aggggtcgcctcggggctgccggcagctcggccagagagagcctggagctgaaggacatc
tttattgcggtgaagaccacgaggaagtaccataagagccggctggacttgctcctccaa
acctggatctcccaggcgaggggacagacatttatattcacagactgggaggatcgggag
ctacgcctgaaagcaggggatcatatgatcaacaccaactgttctgctgtccatacccgg
caagctctctgctgcaagatgtctgtggaatatgataaattcctggaatctgggcaaaag
tggttttgccatgtggacgatgacaactatgtgaaccctcggactctcctacatctcctg
tctgccttttcacacagccaggatgtctatgtggggcgaccgagtctggaccatcccatc
gaagcagctgaccatgtccaaagtgatggatcaaagacaaccgtgaaattctggtttgct
acaggtggagctgggttctgtatcagccgaggtcttgccctgaagatgagtccctgggcc
agcctgggcaatttcattagtactgcagaaagagtgcgtcttcccgatgactgcactatt
ggctacatcatcgaagggctgctggaggtaaagctgctacacagcccgttgttccattcc
cacctagaaaatctgcagaggctgcaaggcgagtctgtgctgcagcaggtaaccctgagt
tatggtgaccctgagaacaaacacaatgtcgtgagtgtgggaggagtgtttggtcttcag
caagatccaacccgatttaaatctgtccattgtctgctttatcctgacactatttggtgc
cccgctaagaagatgtcataa
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