Cyanistes caeruleus (blue tit): 111938847
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Entry
111938847 CDS
T05602
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04110
Cell cycle
ccae04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111938847 (RB1)
04218 Cellular senescence
111938847 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccae01009
]
111938847 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccae03000
]
111938847 (RB1)
Protein phosphatases and associated proteins [BR:
ccae01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111938847 (RB1)
Transcription factors [BR:
ccae03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
111938847 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
DUF1955
Motif
Other DBs
NCBI-GeneID:
111938847
NCBI-ProteinID:
XP_023796579
LinkDB
All DBs
Position
1
AA seq
897 aa
AA seq
DB search
MRDAFPRLEVGEADFVVLCDALKVSEGVREKAWKTYESLSAADGAVQACSKKKKETWGVC
IFIVAVDLDEVTFTFTELLKSINISVCTFFQFLKEVDVNMDTVSTKVDSTVSRLKKKYDV
LFALYHKFERTCGLIYLEQPSSEVSAELSSVLVLKNYWITFLLAKGKVLQVEDDLVISFQ
LLLCVLDYFIKLSPPAMLKEPYKSSVSAVTVNGSARTPRRGQNRSSRTAKQLDTDTKIIE
ILCKEHDCNLDEVKNVYFTSFIPFFNSAGIVASNGLPEVEVILKQYDELYLKNKDIDARL
FLNHDETLQPDVIACSQLERTPLKNNPDEEINIILPQTPVRAAMNNIQQLIMILNSATDK
PSDTLIVYFNNCTVNPKDSILKRVESFDHIFQKKFAEAVGQGWAEIGSQRYKLGVRLYYR
VMESMLKSEEERLSVQNFSKLLNDNIFHTSLLACAVEVVMATYGRNASQSDSTSAETDLS
FPWILNVFDLKAFDFYKVIESFIRAEPSLTREMIKHLEHCEHRIMESLAWQSGSPLFDLI
KQSKEREGQTDQPEPTSALNMPLQHNHTAADLYLSPVKSPKKKASGPPLSATSTPDVQPA
VTPQTQKPQKSTSLSLFYKKVYLLAYRRLHTLFLHLLSEHPDLEALIWTLFQHTLQNEYE
LMRDRHLDQIMMCSMYGICKVKNVDLRFKIIVSAYKELCNTNQETFKRVLIREEQYDSII
VFYNLVFMQKLKTNILQYASSRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKSP
YKFSDGFQSPTKMTPRSRILVSIGESFGTSEKFQKINQMLCNSECQLKRSAEVGAAAPKP
LKRLRFDIEGQDEADGSKHLPQESKFQQKLAEMTSTRTRMQKQKLNDGNDTSASEEK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatgcttttcctaggctcgaggtcggcgaagcggacttcgtcgtgctctgtgat
gcgctgaaggtgtcggaaggcgtgagggagaaagcgtggaagacgtacgagagcttgtcg
gcagcggatggagctgtgcaggcttgtagcaaaaagaaaaaggaaacatggggagtatgt
atctttattgtagcagttgatctggatgaagtgacatttactttcactgagcttttgaaa
agtataaacataagtgtatgcacattttttcagtttctgaaagaggtggatgttaacatg
gatactgtaagcactaaagttgatagcactgtatcaaggctgaaaaagaaatacgatgta
ttatttgcactataccacaagtttgaaaggacttgtggccttatttatctggaacaacct
agtagtgaggtttctgctgaactcagttctgtattagtcctaaaaaattactggattact
tttttgctggcaaaaggtaaagtgttgcaagtggaagatgacctggtgatttctttccag
ttgttgctgtgtgtcttagattattttatcaaactgtcacctcctgctatgctcaaggaa
ccatacaagtcttctgtgtctgcagtgactgtaaatggttcagctcgcactccaagaaga
ggccagaacaggagttctcgtactgcaaagcagcttgataccgacacaaaaattatcgaa
atcctttgtaaagagcatgattgcaatttagatgaggtcaaaaatgtctatttcacaagt
ttcattcctttttttaattctgctggtattgtagcttcaaatggactaccagaggttgaa
gttatcttgaaacagtatgacgagctctatctcaagaacaaagatatagatgcgagacta
tttctgaatcacgacgagactctgcagcctgatgtcatagcgtgctcacagctggagagg
acaccactaaaaaacaatccagatgaggaaatcaatattatacttccacagactcctgtt
cgagcggcaatgaataacattcagcaattgattatgattttaaattcagcaactgataaa
ccatcagatactctcattgtgtacttcaataattgcacagtgaatcctaaggatagtatc
ttgaaaagagtggaaagttttgaccacatcttccaaaagaaatttgctgaagcagttgga
cagggatgggctgaaattggctcacagaggtacaaacttggagtgcgtctctattacaga
gtaatggagtccatgctgaagtcggaggaagaacgcctctcagtgcagaatttcagcaaa
cttctgaatgataacatcttccacacatctcttctggcctgtgctgttgaggttgtcatg
gctacatatggcagaaatgcttcacaaagtgacagtaccagtgctgaaacagacttgtct
ttcccgtggattctcaatgtattcgatttaaaagcttttgacttctacaaggtgatcgaa
agctttattagagcagagcccagcctgacacgagaaatgataaagcatctagagcactgt
gaacatcgaattatggagtctctcgcttggcaatctgggtcacctctgtttgatcttatc
aagcagtcaaaagagcgagaaggccaaactgatcagcccgaacccacttctgctctcaat
atgcctctccagcataaccacactgctgcagacctctatctttctcctgtgaaatctcct
aagaagaaggcatctggacctcctctaagtgctacttccactccagatgttcaacctgct
gtgaccccccaaacacagaaaccgcagaaatctacctccctttctctgttctacaagaaa
gtgtatctactggcctatcgtcgactccacaccttgttccttcaccttctctctgaacat
cctgacctggaagccttgatctggaccctcttccagcacacgctgcaaaatgagtatgag
ctaatgagagacaggcacctggaccagatcatgatgtgttccatgtatggcatatgcaaa
gtaaagaatgtagatcttcgatttaaaataatagtttcagcatacaaggagctttgcaac
acaaatcaagagactttcaaacgtgttcttatccgggaagaacagtatgactccatcata
gtcttttacaacttagtgtttatgcagaagctgaaaacaaacattttgcagtatgcttcc
agcaggcctcccactctgtcacctatcccacacattcctcgcagtccttatcagttttcc
aactctcctcggcgtgttcctgctggcaataacatctacatctcacctctgaagagccca
tacaaattctctgatgggtttcagtcacccacaaagatgactccaaggtctagaattttg
gtgtcaattggagaatcatttgggacttctgaaaagtttcaaaaaataaaccagatgttg
tgcaacagtgagtgccagctgaagcgcagtgcagaagtaggtgctgctgccccgaagccg
ctgaagaggctgcgcttcgacatagaggggcaggacgaggcagatggaagcaaacaccta
ccccaggagtcaaaattccaacaaaagcttgcagaaatgacatctactcgaacaagaatg
caaaagcagaagctgaatgatggaaatgatacctcagccagtgaagaaaagtga
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