Cyanistes caeruleus (blue tit): 111939020
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Entry
111939020 CDS
T05602
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccae03036
]
111939020 (KDM1A)
Enzymes [BR:
ccae01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
111939020 (KDM1A)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
111939020 (KDM1A)
REST complex
111939020 (KDM1A)
Histone demethylases
111939020 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_oxidored
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
GIDA
MurD-like_N
Lycopene_cycl
IlvN
DUF1180
CdiI_2
Motif
Other DBs
NCBI-GeneID:
111939020
NCBI-ProteinID:
XP_023796773
LinkDB
All DBs
Position
23
AA seq
750 aa
AA seq
DB search
MDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDS
SGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWL
DNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVI
IIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPM
AVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLN
NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQY
KEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLS
SRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGL
DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPP
LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPI
LLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYS
YVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA
GRIADQFLGAMYTLPRQPTPGVPPQQAASL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagtcttgcaaacctgtcagaagatgagtattactctgaagaagagagaaat
gctaaagctgagaaagagaaaaaactacccccaccacctccaccagctcctgcagaagaa
gagaatgaaagtgagccagaggagccgtctgggcaagcaggaggacttcaagacgacagt
tctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccagagtaga
cttccacatgaccgtatgacatctcaagaagctgcctgcttccctgatataatcagtggg
ccacagcagactcagaaggtgtttctgtacatcaggaaccgcaccctgcagctctggttg
gataacccaaagattcagctgacatttgaagcaactatccaacagttagaagcaccttat
aatagtgacacagtgctcgttcacagggttcacagctacctggagcgtcatgggctgatt
aactttgggatctacaaaagagtgaagccccttccaaccaagaagacaggaaaggtgatc
attattggttctggagtctctgggttggcagcagctcgccagttgcagagttttggaatg
gatgtcacagttctggaagccagagaccgagtaggaggaagagttgccacctttcgcaaa
gggaattatgttgctgatctgggagcaatggtggtaacaggactgggaggaaatcccatg
gctgtggtcagcaagcaagtaaatatggaactggcaaagatcaaacaaaaatgtccactt
tatgaagcgaatggacaagctgttcccaaagagaaagatgaaatggtggagcaagaattt
aatcgtctgctggaagccacatcctatctcagtcatcagctggattttaatgttctcaat
aataagcctgtctccctaggccaggctctggaggttgtcatacaattgcaggagaagcat
gtgaaggatgagcagattgagcactggaaaaaaattgtgaaaacacaggaggaattgaaa
gatcttcttaacaagatggtgaatttaaaagagaagattaaagaacttcatcagcagtat
aaggaagcatcagaagtgaagccacctcgggatattacagcagagttccttgtgaaaagc
aagcacagagatctgactgcactttgcaaggagtatgatgaattggcagaaacacaaggg
aagctggaagagaaattacaagaacttgaagccaatccaccaagtgatgtttatttgtca
tccagagacaggcaaatacttgactggcattttgcaaatctggaatttgctaatgctact
cctctttctacactttcactgaagcactgggaccaggatgatgactttgaattcacaggc
agtcacttgactgtgaggaatggatattcctgtgtgccagtggccttagcagaagggttg
gatattaaattaaacacggcagttcgacaggttcgctacacagcatcaggctgtgaagtg
atagctgtaaatacccgatctaccagccagaccttcatttataagtgtgatgctgtgctg
tgcactctgcccttgggagtgctgaaacagcagcctccagcagttcagtttgtgccacct
cttcctgaatggaaaacttctgcagtgcagaggatgggatttggcaacctgaacaaggtt
gtgttgtgttttgatcgtgtcttctgggatccaagtgtcaatttgtttggccatgttggg
agcactactgcaagcagaggagaacttttcctcttttggaacctgtacaaagcaccgatt
ttgttggccttggtagcaggagaagcagcagggatcatggagaatatcagtgatgatgtc
attgttggtcggtgccttgccattctcaaaggcatctttggcagcagcgctgtgccccag
cctaaagagacggtggtgtcccgctggcgtgctgacccgtgggcccgggggtcctactcc
tacgtagctgctggatcctctggaaatgactatgatttgatggctcagccaattactcca
gggccagccattccaggtgctccacagcccatccctcgcctgttcttcgcgggtgaacac
accatccgcaactaccccgccacggtgcacggcgcgctgctcagcgggctgcgggaggcc
ggccgcatcgccgaccagttcctgggggccatgtacaccctgccccggcagcccacgccc
ggtgtgcccccccagcaggctgccagcctgtga
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integrated database retrieval system
