Cyanistes caeruleus (blue tit): 111939924
Help
Entry
111939924 CDS
T05602
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccae04040
]
111939924 (SCN4A)
Ion channels [BR:
ccae04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111939924 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
HpsJ
Motif
Other DBs
NCBI-GeneID:
111939924
NCBI-ProteinID:
XP_023798168
LinkDB
All DBs
Position
27
AA seq
1843 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQHVEMPEEEEIKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPHNSTFLEDLGLDNDTLVN
STFYDFTDDFTGNFTGNFTGNFTSNSTFDFEAYISDEANYYFLEGALDALLCGNSSDAGK
CPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFV
VIIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQE
RASSSDSLSSSVAGKGHDSDLNSDQDKAKDCNGQVVPKITLQRSDTVIDFNPTYEPEKPD
LNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLIWNCCLPWV
KLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEM
VLKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPT
LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMN
DFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSF
SADSLAASDDDGEMNNLQIAIGRISRGIAFAKATLLALLRRLWKGKKVAPEEEQDPSKRD
NSVINHVDMALEPKSGYLDGITGKEHIFMDDLDHMNFINNPNLTVQVPIASEESDLYEET
STQSDTEDTTKNPLSSENASSVCSTVDYKPPAPEEEEVAEVAEESNEPEECFTEGCVKRF
PCLYVDITSEKGKVWWNLRKTCFLIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIR
TILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSEL
GAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLF
AGKYYRCVNTTTGELFDIDVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVAT
FKGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQK
KKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKVQGKVFDFVTKQVFDITIMIL
ICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFV
VVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLL
NPILNSGPPDCDPELENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFS
VATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLV
TMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTL
KRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQDALGEDAPEKEGLIATKMQEIYGN
TGTDVETAPALGLEPIPSSETPQDAPEEAQAWAKERVVKESLV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgaaaacctgcgccccttcaccccggcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcgctccggataaagcggcagcac
gtggagatgcccgaggaagaggagatcaagcctagcagtgacctggaagccggcaagaac
ctgcccctcatctatggtgacccacccctggagctcatcgggacccccctggaggacctg
gaccctttctacaaggacaagaagacgttcatagtcctcaacaagggcaagtccatcttc
cgcttctcagccacccctgccctctacatgctggggcccttccaccccatccgcagagga
gccatcaaagtcctcatccattcattattcagcatgttcatcatgatcaccattttaacc
aactgtgtgtttatgacaatgagcaaccccccagcgtggtccaagaacgtggaatatgcc
ttcactgggatctacaccttcgagtctctcatcaagatcctgtcaagaggcttctgcatc
gatgacttcacattcctgcgagacccgtggaactggctggacttcatggtcatctccatg
gcctacattactgagttcgtggacctggggaacatctccgctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcacagtgataccagggctgaagacgatcgtgggggctctg
atccagtcggtgaagaagctctcggacgtgatgatcctcaccgttttctgcctgagtgtc
ttcgccctcatcggcctccagctcttcatgggcaacctccggcagaagtgtgtgcggtgg
cctccccacaacagcaccttcctggaggatttggggctggacaacgacaccttggtcaac
tcaaccttctacgacttcacggacgacttcaccgggaacttcaccgggaacttcaccggg
aacttcaccagtaacagcacctttgacttcgaggcctacatcagcgatgaagccaattac
tacttcctggagggagcccttgatgccctgctctgtgggaacagcagcgatgctgggaag
tgccccgagggctacgagtgcatgaaggctggcaggaaccccaactatggctacaccagc
tacgacaccttcagctgggccttcctggccctcttccgcctcatgacccaggactactgg
gagaacctcttccagctgacactgcgggcagcagggaaaacctacatgatcttttttgtg
gtgatcatcttcctgggctccttctacctcatcaacctcatcctagccgtggtggccatg
gcttacgctgagcagaacgatgccaccatgctggaggagcagcagaaggaggaggaattc
cagcagctcatggaacagctgaagaagcagcaagaggagcaggaaaggctgttgcaggaa
cgcgcatccagcagcgattccctgtccagcagcgtggccgggaaggggcacgactcagac
ctcaacagtgaccaggacaaggccaaggactgcaacgggcaggtggtgcccaagatcacc
ctgcagagatccgacaccgtgattgatttcaaccccacctatgagccagagaagccggat
ctcaaccatctcactgtgggcaaccaagatgggccagggctggagaagagggtgggaagt
gccatcagtgtcatctccaatgctgtggaagaactggaagaagctcaccagaaatgccca
ccctggtggtacaaatttgcccacacattcctgatctggaattgctgccttccgtgggtg
aagctgaaggagtttgtcaagctggtggttatggacccctttgtggacctgggcatcacc
atctgcatcgtgctcaacactctcttcatggccatggagcactaccccatgacggaggag
ttcgagaatgtgctgaccgtggggaacctggtcttcacagggatcttcacagcagagatg
gtcctgaaactcattgctctggatccctatgagtatttccagcagggctggaacatcttc
gacagcttcattgtcactctgagcctggtggagctgggcttggccaacgtgcaggggctc
tccgtgctccgctccttccgcctgctgagggttttcaagctggccaagtcctggcccacc
ctcaacatgctcatcaagatcatcggcaactccgtgggcgccctgggcaacctcactctg
gttctggccatcatcgtcttcatcttcgccgtggtggggatgcagctcttcggcaagagc
tacatcgagtgcgtgtgcaagatctctgtggactgtaccctgccccgctggcacatgaac
gacttcttccactccttcctcattgtcttccgcatcctctgcggggagtggatcgagacc
atgtgggactgcatggaggtggccggccagaccatgtgcctcatcgtcttcatgatggtc
atggtcatcgggaacctcgtggtgctaaacctgttcctggctctgctgctgagctccttc
agcgccgacagcctggcggcgtcagacgatgacggggagatgaacaacctgcagatcgcc
atcggccgcatcagccgcggcatcgccttcgccaaggccacgctcctcgcgctgctgcgc
cggctctggaagggcaagaaggtggcaccagaggaagagcaggaccccagtaaaagggac
aactctgtgatcaaccatgtggacatggccctggagcccaagtcagggtacctggatggc
atcacaggcaaggagcacattttcatggatgacctggaccacatgaatttcatcaacaac
cccaacctgacagtgcaagttcccatcgcctccgaggagtccgacctctacgaggagacc
agcacccagtccgacaccgaggacaccaccaagaaccccctgtccagcgaaaacgcctca
tccgtgtgcagcaccgtggattacaaaccccccgcgcccgaggaggaggaggtggcagaa
gtggctgaggagagcaacgagcccgaggagtgtttcactgaaggctgtgtgaagaggttc
ccctgcctctacgtggacatcaccagtgagaaggggaaggtttggtggaacctcaggaaa
acctgtttcctcatcgtggagcatgactggtttgagaccttcatcgtcttcatgatcctc
ctcagcagcggggcactggcttttgaggacatctacattgagcagcgcaaggtgatccgc
accatcctggaatacgcagacaaggtcttctcctacatcttcgtcatcgagatgctgctc
aagtgggtggcctatggcttcaaggtgtacttcaccaatgcttggtgctggctggatttc
ctcatcgtggatgtgtccctggtcagcctgacagcaaactggctgggatactccgagctg
ggagccatcaaatccctgcggacattgagggctctgcgacctctgcgtgctctgtcccgg
tttgagggcatgagggtggtggtgaatgccttgctgggtgccatcccctccatcatgaac
gtcctgctggtctgcctcatcttctggctgatcttcagcatcatgggggtgaacctgttt
gcagggaagtattacaggtgtgtcaacaccaccacgggcgagctcttcgacatcgacgtg
gtcaacaacaagagcgactgcatggccctgctccacaccaacgaggtcagatgggtcaac
gtcaaggtcaactttgacaacgtgggcttgggatacctgtccctgctgcaggtggcaacc
ttcaaaggctggatggacataatgtacgcagccgtggactcgcgtgagattgaagagcag
ccacagtacgagatcaacctctacatgtacatctattttgtcatcttcatcatctttggt
gccttcttcaccctgaatctcttcatcggcgtcatcatcgacaacttcaaccagcagaag
aaaaagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactacaacgcc
atgaagaagctgggctccaagaaaccccagaagcccatccccaggccagcgaacaaagtc
caagggaaagtgtttgactttgttaccaagcaagtgtttgacatcaccatcatgatcctg
atttgcctgaacatggtgaccatgatggtagaaacagatgaccagagcgagctcaaaacc
tctgtcctctacaagataaacctggtcttcatcgtcatcttcaccggggagtgcgtgctc
aagatgtttgccctgcgccactactttttcactgtgggctggaacatctttgacttcgtg
gtggtcatcctctccatcctaggtattgtcctctcggacatcatcgagaagtactttgtg
tcccccaccctcttcagggtcatccgtctggcgaggattggccgcgtgctccggctgatc
cgaggagccaaaggcatccggacactcctctttgccctgatgatgtccctgcctgccctg
ttcaacatcggcctcctgctcttccttgtcatgttcatctactccatcttcgggatgtcc
aacttcgcctacgtcaagaaggagtcagggatcgatgacatcttcaactttgaaacgttt
gggaacagcatcatctgcctcttccagatcaccacgtcagcggggtgggatgggctcctc
aaccccatcctcaacagcggccccccggactgtgaccccgagctggagaaccctgggagt
tcagtgaaaggagactgtgggaacccctccattggcatcttcttcttctgcagctacatc
atcatctccttcctcatcgtggtgaacatgtacattgccatcatcctggagaacttcagc
gtggccacagaggagagcagcgagcctctctgtgaagacgattttgaaatgttttatgaa
acttgggagaagtttgacccagatgccacccagttcatcgcctacagcaccttgtctgac
tttgtggacaccttgcaggagccactcagagttcccaagcccaacaagatcaaacttgtc
accatggacctaccaatggttgctggggacaaaatccactgcctagacatcctctttgcc
ctgactaaggaagtgctgggagactcaggagagatggatgccctgaaggccaccatggag
gaaaagttcatggctgccaacccctcaaaagtttcctatgaacccatcaccaccaccctg
aagaggaaacatgaggaggtctgtgctaccaagatccagagggctttccggagatacctc
ctgaggcgctcggtgaaacaggcgtcctacatgtacaggcacagccaggacgccctgggc
gaggacgcgcccgagaaggaaggactgatcgccaccaaaatgcaggagatctatgggaac
actgggacagacgtggagacagcccctgccttgggcctcgagcccattcccagctcagag
acacctcaggatgctcctgaggaagcacaggcttgggctaaggaacgtgtggtgaaggaa
tcgctggtgtaa
DBGET
integrated database retrieval system
