Cyanistes caeruleus (blue tit): 111940108
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Entry
111940108 CDS
T05602
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03440
Homologous recombination
ccae03460
Fanconi anemia pathway
ccae04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111940108 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
111940108 (BRCA1)
03460 Fanconi anemia pathway
111940108 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccae01009
]
111940108 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111940108 (BRCA1)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111940108 (BRCA1)
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111940108 (BRCA1)
Enzymes [BR:
ccae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111940108 (BRCA1)
Protein phosphatases and associated proteins [BR:
ccae01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111940108 (BRCA1)
Ubiquitin system [BR:
ccae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111940108 (BRCA1)
Multi subunit type E3
BRCC complex
111940108 (BRCA1)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111940108 (BRCA1)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111940108 (BRCA1)
BRCA1-A complex
111940108 (BRCA1)
BRCA1-B complex
111940108 (BRCA1)
BRCA1-C complex
111940108 (BRCA1)
BRCA complex
111940108 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
111940108 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_6
BRCT_3
RING_XB3-XBAT31
zf-Nse
zf-C3HC4_3
Pepco
zf-RING_5
RTT107_BRCT_5
zf-ANAPC11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111940108
NCBI-ProteinID:
XP_023798432
UniProt:
A0A8C0VMQ0
LinkDB
All DBs
Position
27
AA seq
1804 aa
AA seq
DB search
MDFSVIAIGQVQNVLSAMQKILECPICLDVVQEPVSTKCDHIFCRFCIFKHISKKKKGVV
ECPLCKTEVSKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLKSHYLHKTSTEVTAAES
LCKESSVIQSKGFRNRRKSAKGNGQENLTLQEASVNIQLTDAKMCRSRNKPQKSDSQKGT
YIDLGSESSEEFFKQASKTGFEDKVTIQISSQERLEELESAEKGNENSCSAQPDKLCAKE
TMLPNVRGESDFSKECLSKKSTQSIAECAKPDQVSVTECQSSALNILAVDLPPEQCDRTG
DATVDGDTTFRKNTEEMDKQETQDNSESQEFDLEDSSESRLDKSKEMDADVQSMEAVEAC
EPENDSSQDNELPLEKLPQPETLHPATLNKISKKRLKQSIQKVNEWFSKSNEILSSSSSL
DESAASADVSGEGELCLSDKGSCISEKTDPLADSMEIPAVEGKKRWSKQTVEDIKGKIFG
KTYNNRRRKSNAPSTLRDILPTRRKEDASAEKCLNDFNKDRLKQKRKTACVLQPEDFIKK
KKNTEEADRGPQSLNWGLGDAEKNRCDESVSVNESHFSQNKANKTLTELEEGGEPTCKKA
SDKVTTKHCDGEPEMDNCDQKSTKKRSSAAKRCKHSSRNMCALQLVVDRSSVFRDPAEPQ
IDSYPSSGEPRKADSEQNPVRRSRRLRVLSEEMTKETRKGVKGARKKNSDCGRSVSGDQR
NVATHSAECKDLCDPQDELSYRPVTNLEGGDLEANEMQVSLKNLSDTAETGRSLFNPSCQ
PSNCGSTVPDTCSQDSEILGSPLLLQLPSVSAGKTTSHQTEEVTESPTAFSQECGHDSQN
VPGDLKTEKLPMAKNVLELTKEAEDSDLDTQYLRNIFRHSKRSSFSLFQTPRQAHAVKDP
PPETSNLSCAAQVENKGGKQLQLESLQEEKAAAQNLSRVSEKEKTYESDPVDPVPCFAVS
TREHRDDISQAAEEGTLTPAGVGTAQTEHKNGLLQEEQGNEKPVSNEIGIEKLRHNPIKS
NESQSDQSNTDDDSRQNDLNTGQEISFSSEINQAGKTEVVDCKGPVLHFQSPSIICPATC
QQSPAEISCEVTRTKSSKAVAPVKGNEEQAAHTVSTAMPKCSTAEEEPLGENRDLTDLSE
TPNGLLCSDTDIEENSSLCETDRKEQSAVFVKSDNALGKELLKRNASSRPRSGGIQKSRR
RVQKLPSSDEESCEDEDLPCFQTLIFSKSASTPLQTDKQMSSVAEPSVSECPVSPNVLPH
SVSNDNIVQEVPEVALSNVCVSPSQESECSVSLFSSQSNVSEEPLNGAQEVKKHLPEAHV
SKQMSSVNNSKETSQNCSGGLKTTKDECQEFPDIGANLGEASGYDSEISVVEDSCGPFSQ
GEILTTQQKNAMQKSLRKLQQEMAVLEAALKQNGSQTCEVLPVHRELPHSSTEGALETDQ
IREGKNRSPELVLPSSKSSSTKRSDLEKGPECDCVLKKETPSEKTKPVQEALQEHRQCQL
EEENSKEKKSGTGQHSASVSSLSGNVTQCPENSSCSVRLFTPQAAEATDEPVVAQNTDKS
CGPGHKLKRSGCFPVPVLHNATGEKNYTSPVVTKRKEMSIVASGLNHSEHLVVQKFVKKT
QSTLSNHITEGTTHVIMKTDEELVCERTLKYFLGIAGGKWVVSYQWIIQSFKEGRILDEE
NFEVRGDVINGRNHQGPKRARQALTEKIFKGFEICCCGPFTDMTTEHLEWMVELCGASVV
KQPDLFTHTANSTAVVVVQPDAWKEDVDYRAIHQQSNVAVVTREWVLDSVACYECQEFSA
YLLS
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattgctattggacaagtacaaaatgtgctttcagctatgcagaag
atcttggagtgcccaatatgcttggatgtggtacaagagcctgtttcaacaaaatgcgat
cacatattctgcaggttctgcatattcaaacatatcagcaaaaagaagaaaggtgtggta
gagtgtcctctgtgtaagactgaagttagcaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaacaatccatgcttttgagcttgacactggagtg
aagtttttaaagagtcattaccttcataaaacatccacggaagtcactgctgctgagtcc
ttgtgtaaagaaagttctgtcatccaaagtaaaggcttcagaaacaggagaaaaagtgct
aaaggaaatggacaagaaaacttaaccttgcaggaagctagtgtgaatattcagcttaca
gatgccaaaatgtgtcgctcaagaaacaaaccccagaaatctgattctcaaaagggtact
tacatagacttgggctctgaatcatctgaagagtttttcaaacaggcaagcaaaactggg
tttgaagacaaagtaacaattcagatttcttctcaagaaaggctggaagaacttgagagt
gctgagaaggggaatgaaaattcttgcagtgcacagcctgacaagctgtgtgccaaagaa
acaatgctaccaaatgtcagaggtgaaagtgatttctcaaaggaatgcttgagcaagaaa
agcactcagagcattgctgaatgtgccaaacctgaccaagtgagtgtgactgaatgccag
agttctgctttaaatatccttgctgtagacctgcccccagagcagtgtgacaggacaggt
gatgccacagtggatggggacacaacattcagaaagaacacagaagaaatggataaacag
gaaacccaggacaacagtgaaagccaagagtttgatttagaagacagctcagagagcagg
ctggataaaagcaaggaaatggacgctgatgtacaaagtatggaagctgtagaggcatgt
gaacctgagaatgactcttcccaggacaatgaacttcctctggagaagctgcctcagcca
gagacacttcaccctgccaccctgaataaaatctccaagaagagactgaagcagagcatt
cagaaagtcaatgaatggttttcaaaaagtaatgaaattttgtcttccagttcttccctg
gatgaatctgctgcatcagctgatgtttcaggtgaaggagaactgtgtttatcagataaa
gggtcttgtatttcagaaaaaactgaccctttggcagattccatggaaattccagcagtg
gaaggaaaaaagaggtggtcaaaacaaacagtagaagacatcaaaggcaaaatatttgga
aaaacatacaacaacagaaggaggaaatcaaatgccccttctaccttgagagacattttg
cctactaggagaaaggaagatgcgtctgctgaaaagtgcctgaatgatttcaacaaagac
agactcaaacaaaagaggaagactgcctgtgtcctgcaacctgaggatttcataaagaaa
aaaaaaaatacagaagaagcagacaggggccctcaaagtcttaactggggccttggagat
gctgaaaagaacagatgtgatgaaagtgtttctgttaatgaaagtcacttctctcagaat
aaggcaaataagactctaacagaacttgaggagggaggggaacccacatgcaagaaagct
tctgacaaggtcactaccaagcactgtgatggggaaccagaaatggataactgtgatcag
aaaagcaccaaaaaaagaagttctgcagcaaaaagatgcaagcattctagtagaaatatg
tgtgctctgcagttagtagtggacagaagctctgttttccgtgatccagctgagcctcag
atcgatagctatccgagcagtggggagcccaggaaagctgattctgagcaaaatccagtc
aggcgcagcagaaggcttcgggtcctttctgaagaaatgacaaaagaaacaaggaaagga
gtaaagggagcaagaaagaaaaacagtgattgtggaaggtctgtctctggagaccaaagg
aatgtggcaactcactctgctgagtgcaaagacctgtgtgatcctcaagatgagttgagt
tacaggccagtcactaatttggagggaggtgatctggaagcaaatgaaatgcaggttagt
ctaaagaatttatctgacactgcagaaactgggagaagtctgttcaatccttcatgtcag
ccttcaaactgtggctccactgtgcctgatacgtgttctcaagacagtgaaatactaggt
agccctctcctcctacaacttccttcagtgtctgctgggaaaactacttctcaccagact
gaagaggtgactgaatcacctactgctttttcccaggagtgtgggcatgattcacaaaat
gttccgggggacttaaaaactgaaaagttgccaatggctaaaaatgtgttggaattgacc
aaggaagctgaggacagtgacttggacacacagtatctgcgaaatatatttaggcattca
aagcgctcctccttcagcctttttcagactcccaggcaggcacatgcagtgaaagatcct
cctcctgaaacctccaatctatcatgtgctgctcaagtagaaaataaaggtggcaaacag
ttacaattggaaagcttacaagaggagaaagcagctgctcagaacttgagcagagtttct
gagaaagagaagacgtatgagtctgaccctgttgatcctgtgccttgctttgctgtcagc
acaagagaacacagggatgacatttcacaggctgcagaggaagggactctgacaccagca
ggagtagggactgctcagactgagcacaaaaatggattgctacaagaagagcagggcaat
gaaaagccagtgtcaaatgagatagggatagaaaagttgagacacaatcccatcaaaagt
aatgaaagccaaagtgatcagagtaacacagatgatgattccagacaaaatgatttaaac
acaggccaggaaatcagcttcagttcagaaatcaatcaggcaggaaagactgaagttgtt
gattgcaaaggaccagttctacattttcaatccccatcaataatttgtcctgcaacttgt
cagcaaagcccagctgaaatcagctgtgaagtcactagaacaaaaagtagcaaagcagta
gctcctgtgaagggaaatgaagaacaagcagcccatactgttagcacagcaatgcccaag
tgttcaactgcagaggaggaacctcttggagagaatcgtgacctcacagatttgtctgaa
acccctaatggcttgctgtgctctgatactgatattgaggagaacagcagcttatgtgaa
actgataggaaagaacaatctgcagtgtttgtaaaaagtgacaatgccctgggaaaagaa
ctgctcaagagaaatgcaagttccaggccaaggtctggaggtattcaaaagtctcgaaga
cgagtgcagaaactgccatcttcagatgaagagtcctgtgaggatgaagacttaccatgc
tttcagacattaatattcagcaaatcagcaagcacacctttgcagactgataaacaaatg
tcatctgtggcagagccttcagtgtcagagtgtccagtgagtcccaatgtgttgcctcac
agtgtgagtaacgacaatattgtgcaggaagtgcctgaagttgccctaagtaatgtgtgt
gtttcaccaagccaggagtcagaatgctctgtcagcttattttcttcccagtccaatgtg
tctgaagaaccacttaatggagcacaagaagtgaagaaacatttaccagaagctcatgtg
tccaaacaaatgagcagtgtaaacaacagtaaagaaacttctcagaactgcagcggaggg
ctgaagacaaccaaagatgaatgtcaagaatttccagacattggagcaaatctaggtgaa
gcatctggatatgacagtgaaataagtgttgtagaagattcctgtgggccattctctcag
ggggaaatcctcactacacagcagaagaatgctatgcagaaaagcctgagaaaacttcag
caagaaatggctgtgcttgaagcagcgctaaagcagaatggaagtcagacctgtgaagtt
ttacctgtccacagggagctgccacattccagtactgagggggcacttgaaacggatcaa
ataagagaaggaaaaaacaggtctccagaattggttctcccatcttctaaatcctcttca
acaaagagatcagatctggagaaaggccctgagtgtgactgtgttctaaagaaggaaact
ccctctgaaaagacaaaacctgtgcaggaagcactgcaagaacacaggcagtgtcagctt
gaggaagaaaattcgaaggagaagaaatctgggaccgggcaacacagtgcatctgtctca
tcactttctggaaatgtgacccagtgtccagagaactcttcctgctctgtaaggcttttt
acccctcaagctgcagaagccacagatgagcctgttgtagctcagaacactgataaaagc
tgtggcccaggacacaaattaaagagaagtggatgctttcctgtacctgttctgcacaat
gcaactggggaaaaaaattatacaagtccagttgtgaccaagaggaaagaaatgtcaatt
gtggcatcaggtctgaatcacagtgagcatctggtggtccagaagtttgtgaaaaaaact
cagagcaccttatctaatcacattactgaaggaacaacccatgtcataatgaaaacagat
gaagagctggtgtgtgaacggactctgaagtatttcctgggcattgcaggaggaaaatgg
gtagttagttatcagtggataattcagtcttttaaagaaggaagaatactggatgaggag
aactttgaagtcagaggagatgtaatcaatgggcgaaaccatcaaggtcctaagagggcc
agacaggccctgactgaaaagatctttaaaggctttgagatctgttgctgtgggcctttc
actgatatgactacagagcatctggagtggatggtggagctgtgtggtgcctctgtggtg
aagcagcctgacctgttcacacacacagcaaattctactgctgttgtggttgtgcagcca
gatgcttggaaggaagacgtggattatagagcaatccaccagcagagcaacgttgctgtg
gtaactcgggaatgggtcctggacagcgtggcttgctacgagtgccaggagttcagtgct
tacctcctgtcctaa
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integrated database retrieval system
