Crenobacter cavernae: DWG20_06880
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Entry
DWG20_06880 CDS
T09767
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ccah
Crenobacter cavernae
Pathway
ccah01501
beta-Lactam resistance
ccah01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DWG20_06880
01503 Cationic antimicrobial peptide (CAMP) resistance
DWG20_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccah03036
]
DWG20_06880
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccah02000
]
DWG20_06880
01504 Antimicrobial resistance genes [BR:
ccah01504
]
DWG20_06880
Chromosome and associated proteins [BR:
ccah03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DWG20_06880
Transporters [BR:
ccah02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DWG20_06880
Antimicrobial resistance genes [BR:
ccah01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DWG20_06880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
HH_EMRA
CzcB_C
YknX_C
Beta-barrel_RND_2
BSH_CzcB
HH_AAEA_pHBA
HH_YBHG
BSH_CusB
BSH_YhbJ
BSH_LcnD
bL31_N
Motif
Other DBs
NCBI-ProteinID:
AXK40836
LinkDB
All DBs
Position
1414629..1415696
Genome browser
AA seq
355 aa
AA seq
DB search
MPVGVVSTVAKDVPVPFEFVGQTAGSREVEVRARVGGILLKRAYTEGKSVKQGDLLFQID
PAQFQAALDQAQGALKVEEAQRARTRQDYDRILPLFKENAVSQKDRDDAAAAYQSAQASV
AAAQARVKEAQINLGYTRVTAPISGMTSKEVRSEGSLVSTGDGSLTKISQIDPMYVNFSF
SDNDLLAFRRDEQSGKLKLPEDRRFEVSVKLSDGSSYAKSGRLNFTDNLIDPSTGTIRAR
AEFANPDGELLPGQFVRVFLNGAKRVNAILIPQRAVLTSQQGKMVWVVDAKNTVAPRPVT
LGAEVGDQVLVETGLKPGERVVIDNIIKLRPGAPVKPEALKPEAAEASAPAKANG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcggcgtggtgagcaccgtggccaaagacgtgccggtgccgttcgagtttgtc
ggccagacggccggctcgcgtgaggtggaggtgcgcgcgcgcgtcggcggcatcctgttg
aagcgggcttacaccgagggcaagtcggtcaagcagggggatctgttgttccagatcgac
ccggcacagttccaggccgcgctcgatcaggcacagggcgcgctcaaggtcgaggaggcg
cagcgggcgcgcacccgccaggattacgaccgcatcctgccgctgttcaaggaaaacgcg
gtcagccagaaggaccgcgacgatgcggcggccgcctaccagtcggcgcaggcttcggtc
gccgccgcgcaggcccgcgtcaaggaagcgcagatcaacctcggctacacccgcgtcacc
gcgccgatctcgggcatgaccagcaaggaagtgcgttccgagggcagcctggtgagcacc
ggcgacggttcgctgaccaagatctcgcagatcgacccgatgtacgtcaacttctcgttc
tcggacaacgatctgctggcattccgccgtgacgagcagtccggcaagttgaagcttccc
gaggacaggcgcttcgaggtgtcggtcaagctgtccgacggttcgagctacgccaagtcg
ggccgcctcaacttcaccgacaacctgatcgacccgtcgaccggcaccatccgtgcgcgc
gccgagttcgcgaacccggacggcgagctcctgcccggccagttcgtgcgcgtgttcctg
aacggcgccaaacgcgtcaacgccatcctgatcccgcagcgcgcggtgctgacctcgcag
cagggcaagatggtctgggtggtagacgcgaagaacaccgtcgcgccgcgaccggtcacg
ctcggcgccgaagtgggcgaccaggtgctggtcgagaccgggctcaagcccggtgagagg
gtcgtgatcgacaacatcatcaagctgcgcccgggtgccccagtgaaaccggaagcgctt
aaacccgaagcggccgaggcgagcgcgccggccaaggccaacggctaa
DBGET
integrated database retrieval system
