Crenobacter cavernae: DWG20_06885
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Entry
DWG20_06885 CDS
T09767
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ccah
Crenobacter cavernae
Pathway
ccah01501
beta-Lactam resistance
ccah01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DWG20_06885
01503 Cationic antimicrobial peptide (CAMP) resistance
DWG20_06885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccah02000
]
DWG20_06885
01504 Antimicrobial resistance genes [BR:
ccah01504
]
DWG20_06885
Transporters [BR:
ccah02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DWG20_06885
Antimicrobial resistance genes [BR:
ccah01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DWG20_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AXK39180
UniProt:
A0A345Y5H8
LinkDB
All DBs
Position
1415714..1418860
Genome browser
AA seq
1048 aa
AA seq
DB search
MFSAFFIRRPIFASVLSIVIMLAGLAAIRALPIEQYPQIVPPNVSVTANYPGASAEVIAD
TVAAPLEQAINGVDDMLYIQSSSSSNGTLTLSVTFKVGTDADQATINVNNRVQSALAKLP
EEVRRQGVTVKKRSTSFLQVISLYSPDKSYDTLFISNYATLNVIDELARTPGVGEVVNFA
GQDYSMRVWLRPDKLAQLKLTPGDVAGAIREQNSQFAAGKLGAEPLSQTQEFTYTVTTKG
RMTDPEEFENIIVRSNPDGSTVRVKDVARVELGALSYTFNGKHNGRPTIPIGIYLAPGAN
QLDTAKAVEDTMARLSKSFPQGLSYDIPYNTTRFVEVSIKEVIKTLAEAMALVFLVVYLF
LQNWRATLIPSLAVPVSIVGTFAGMYLLGFSINTLTLFGMVLSIGIVVDDAIVVLENVER
IMMKEGKSPFDATMQAMQEVSGPVVAIVLVLCSVFIPVAFLGGIAGQMYKQFAITIAVSV
SISGLVALTLTPALCALILKPGHQHQHHLFDKFNAFFDWATGRYTDGVRFFIKRAALGGL
LFAGLIVVCVGLFRMIPSSLAPDEDQGYIVSATILPDASSIKRTEAAMDQLDAMLLKNKA
VQDVMSFAGFDILSGANKTNAGATFVILKPWDERTSADESAQAIAGQVFGMGARIKDAIV
LAFNPPPISGMSNTGGFEGYLQSRGGGDVHALGEMTQKLVAAAAKRPELAGVQTTFSPNV
PQLFVALDREKAKALGVPVNDVFDTLQGTFGALYVNDFNKFGRIFRVQIQADGDFRAKAD
DIRFIYVRSQNGEMIPLSSLVTITQSTGPETLERFNVFPAAKLVGGPAPGYSSGEALAAM
EAVAKDVLPDDYGLAWSGSAFQEQSTSGSSAIVFVFGMIMVFLILAAQYERWTLPVAVLM
AVPFAVFGALAANWLRGLANDVYFQVALVTLIGLAAKNAILIVEFAVLKMEEGLALADAA
VEAAKLRFRPIVMTSLAFVFGCVPLAISTGAGAASRHSIGTGVIGGMLAATFIATFLIPL
FFLLIMKWSGSERLKAPARAAEEGVQHD
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgctttcttcatcaggcggccgatcttcgcttcggtgttgtcgatcgtcatc
atgctcgccggcctcgcggccatccgcgcgctgccgatcgaacagtacccgcagatcgtc
ccgccgaacgtctcggtcaccgccaactatccgggcgcgtcggccgaggtgatcgccgac
accgtcgccgcgccgctcgagcaggcgatcaacggcgtcgacgacatgctgtacatccag
tcgtcgagttcgagcaacggcacgctgacgctgtcggtcaccttcaaggtcggcaccgac
gccgaccaggcgacgatcaacgtcaacaaccgcgtgcagtccgcgctcgccaagctgccc
gaggaggtgcgccgccagggcgtgacggtcaagaagcgttcgacgtctttcctgcaggtg
atctcgctgtactcacccgacaagagctacgacacgctgttcatcagcaactacgcgacg
ctcaacgtgatcgacgagctggcgcgcacgccgggcgtcggcgaggtggtcaacttcgcc
ggccaggactattcgatgcgcgtctggctgcgtccggacaagctcgcgcaattgaaactc
actccgggcgacgtcgccggcgcgatccgcgagcagaactcgcagtttgccgcgggcaag
ctcggcgccgaaccgctcagccagacgcaggagttcacctacacggtgacgaccaaggga
aggatgaccgatcccgaggagttcgagaacatcatcgtgcgctcgaacccggacggctcg
accgtgcgcgtgaaggacgtcgcgcgcgtcgaactgggcgcgctcagctacaccttcaac
ggcaagcataacggccggccgaccatcccgatcggtatctatctcgcgccgggcgccaac
cagctcgacaccgcgaaggcggtcgaggacacgatggcgcggctgtctaagagcttcccg
caggggctgtcgtacgacatcccgtacaacacgacgcgcttcgtcgaggtatcgatcaag
gaggtgatcaagacgctggccgaggcgatggcactggtgttcctcgtcgtctacctgttc
ctgcagaactggcgcgcgacgctgatcccgtcgctcgccgtgccggtgtccatcgtcggc
accttcgccggcatgtatctgctcggcttctcgatcaacacgctgacgctgttcggcatg
gtgctgtctatcggtatcgtcgtcgacgacgccatcgtcgtgctcgagaacgtcgagcgg
atcatgatgaaggagggcaagtcgccgttcgacgcgacgatgcaggcgatgcaggaggtg
agcgggccggtggtcgcgatcgtgctcgtgctgtgctcggtgttcatcccggtcgccttc
ctcggcgggatcgccggccagatgtacaagcagttcgcgatcacgatcgcggtgtcggtc
agcatctcgggcctcgtcgcgctgacgctgacgccggcgctgtgcgcgctgatcctcaag
cccggccaccagcatcagcaccacctgttcgacaagttcaacgccttcttcgactgggcg
accggccgctacacggacggcgtgcgcttcttcatcaagcgcgccgcgctcggcggcctc
ttgttcgccgggctgatcgtcgtgtgcgtcgggctgttcaggatgatcccgtccagcctc
gctcccgacgaggaccagggctatatcgtcagcgcgaccatcctgcccgacgcttcgtcg
atcaagcgcaccgaggccgcgatggaccagctcgacgcgatgttgctcaagaacaaggcg
gtccaggacgtgatgagcttcgccggcttcgacatcctttcgggcgcgaacaagaccaac
gccggcgcgaccttcgtcatcctgaagccctgggacgagcgcacgtcggccgacgagagc
gcgcaggctatcgccggccaggtgttcggcatgggcgcgcgcatcaaggacgcgatcgtg
ctcgcgttcaatccgccgccgatctcggggatgtcgaacaccggcggcttcgagggctac
ctgcagagccgcggcggcggcgacgtgcacgcgctcggcgagatgacgcagaagctcgtc
gccgcggcggccaagcgtccggaattggccggcgtgcagaccaccttcagccccaacgtg
ccgcagctcttcgtcgcgctcgacagggagaaggcgaaggcgctcggcgtgccggtgaac
gatgtgttcgacacgctgcagggcaccttcggcgcgctgtacgtgaacgacttcaacaag
ttcggtcgcatcttccgcgtccagattcaggccgacggcgacttccgcgccaaggccgac
gacatccgcttcatctacgtgcgttcgcagaacggcgagatgatcccgctgtcttcgctg
gtgacgatcacccagagcaccggcccggaaacgctcgagcgcttcaacgtgttcccggcg
gccaagctcgtcggcggaccggcgccgggctacagctcgggcgaggcgctcgccgcgatg
gaggccgtggccaaggacgtgctgcccgacgactacggtctcgcgtggagcggctcggcc
ttccaggagcagtcgacctcgggttcttcggcgatcgtgttcgttttcggcatgatcatg
gtgttcctgatcctcgccgcgcagtacgagcgctggacgctgccggtcgcggtgctgatg
gcggtgccgttcgcggtgttcggcgcgctcgcggccaactggctcagggggctcgccaac
gacgtctacttccaggtcgcgctggtgacgctgatcggcctggcggccaagaacgcaatc
ctgatcgtcgaattcgcggtgctgaagatggaggaggggctcgcgctcgccgacgcggcg
gtcgaggcggccaagctgcgtttccgtccgatcgtgatgacctcgctcgccttcgtgttt
ggctgcgtgccgctggcgatttccaccggcgccggcgcggcgagtcgtcattcgatcggc
accggggtgataggcggcatgctggcggcgaccttcatcgccaccttcctgatcccgctg
ttcttcctgttgatcatgaagtggtcgggcagcgagcgcctgaaggcgccggcccgcgcc
gccgaagaaggagtgcaacatgattaa
DBGET
integrated database retrieval system
