Cajanus cajan (pigeon pea): 109795045
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Entry
109795045 CDS
T04868
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109795045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109795045
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109795045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
Arf
AAA_23
AAA
ORC-CDC6-like
AAA_30
Zeta_toxin
nSTAND3
AAA_7
AAA_28
Motif
Other DBs
NCBI-GeneID:
109795045
NCBI-ProteinID:
XP_020210040
LinkDB
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Position
2:complement(24305883..24309507)
Genome browser
AA seq
333 aa
AA seq
DB search
MAVEGTSLDSKAATIVIKDLRFTYPGIGGHPPPGSTPLIQNFSLTLSSGERCLLVGSNGA
GKTTILKILGGKHMVEPDMVRVLGRSAFHDTNLVSSGDLCYLGGEWRRDVAFAGFEVPIQ
MDVSAQKMIFGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLL
LDEITVDLDVLARADLLRFLRKECDERGATVIYATHIFDGLEDWPTNIVYVAHGRLQLAM
PMDKVKEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEFGKQVEGSRVTGDPARAA
VRVVNNGWAAGRLNSTVAGEQNFILSSNRVLRQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgaaggaaccagtttggattcaaaagcagcgacgattgtgataaaggatctc
cgattcacttaccccggcatcggcggccatcctccgccgggttccactcctctcattcag
aatttctctctcactctctcttccggcgaacgatgccttctcgtcggttccaacggcgcc
ggaaagacgacgatcctgaagatactaggagggaagcacatggtggagcctgacatggtt
cgcgtgctcggcagatcggcttttcacgacaccaatttagtatcttctggtgacctctgt
tatcttggcggcgagtggaggcgagatgttgcttttgcagggtttgaggttccgatacaa
atggacgtttctgctcaaaaaatgatatttggtgtggctgggattgatcctcaaagaaga
gcagaattaatcaaggtattagatattgatctttcctggagattgcataaagtgtctgat
ggtcaaagaagaagagtgcaaatttgtatgggtctcctcaaaccgttcaaggttcttctt
ctcgatgagataacagttgatcttgatgttctagcgagagccgaccttctgaggtttcta
agaaaggaatgtgatgagaggggtgccactgttatctatgcaacacatatatttgacggt
ctcgaggattggccaacaaatatagtttatgtagcccatggaaggctgcaactagcaatg
cctatggacaaagtcaaagaaattagcaaattgtcactaatgagaacagtagaaagttgg
ctgcgaaaagagcgagacgaagacagaaagaaaaggaaagagagaaaagcagctgggctt
cctgaatttggaaagcaagttgagggaagccgtgtaacaggggatccagcgcgtgctgca
gttcgtgtagttaataatggctgggcagcaggacgattaaattccaccgttgctggtgag
caaaactttatcctcagctcaaaccgagtattgaggcaatag
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