Cajanus cajan (pigeon pea): 109797206
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Entry
109797206 CDS
T04868
Name
(RefSeq) transcription factor PIF3 isoform X2
KO
K12126
phytochrome-interacting factor 3
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04075
Plant hormone signal transduction
ccaj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109797206
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109797206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaj03000
]
109797206
Transcription factors [BR:
ccaj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109797206
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GFIT
Motif
Pfam:
HLH
bHLH_LHW
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
109797206
NCBI-ProteinID:
XP_020212751
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All DBs
Position
3:26355853..26359327
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AA seq
544 aa
AA seq
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MNNNTCGTVDQSSTLNNDLFELVWEKGQISVQGQSSRARKNPNCKSFPSHSPRREVGYIN
ANANNVTNTRIGKYENLGGELDVSEKEEDMVMPWWNYGVDDSLQHGYNSDLFHQLSGVTM
NGLSSSDNFSLLDRRNNCNKVSRDTHKHSSFASVSRVENIAENNTKGEDTQIPSFSSGFS
SLKMERQGLTMCSNSSTVMNFSHFAKPAAMVRANLEYLTSRSASVGIKNRGAAATATNPD
EPKKLGTHSYRHQVIEPKSVEHDGVVSTKCDPSWKDISKIGQTSNLVVGESENKGEEAAA
KNVEPTIVSSSVCSGNGAERGSGDPNQNLKQKSRDTEDFEWQSEDLEEESVGVKKDVPAP
RVGSKRNRSAEVHNLSERRRRDRINEKMRTLQELIPNCNKADKASMLDDAIEYLTTLQLQ
LQIMSMGSGLCMPAMMLPPGMQHMYGSPHMSPYSGIGVGMQMRLGMGMHDGNDECYRFPM
IQGNQHTQVFGLPMPMPHAPIFSFSADQPFMSPSTLGLNACETMDPMPQHVQNNNACSTN
QVLL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacacatgtggtacagttgatcaatcttccacactcaacaatgatttgttt
gagctggtttgggaaaagggtcagatttcagtgcagggtcagtccagcagagctagaaag
aacccaaattgtaaaagttttccatctcacagtccaaggagggaagtaggatatattaat
gctaatgctaataatgttaccaatacaaggatagggaagtatgagaatttaggtggtgaa
ttggatgtaagtgaaaaagaggaagacatggtgatgccttggtggaattatggagtggat
gactctttgcaacatggatataattctgatttattccatcaactatctggggtcaccatg
aatggcctctcatcctcagataatttttctttgctagatagaagaaataattgtaacaag
gtatctagggacactcataaacactcttcatttgcatctgtatccagggtagaaaatata
gctgaaaacaacacaaaaggggaagacactcagattccatctttctcaagtggtttttcc
agcttaaagatggagaggcaaggtttaactatgtgtagcaatagttccaccgtgatgaat
ttttcccattttgcaaaacccgctgctatggtcagagcgaaccttgagtacttgacatca
agatcagcaagtgttggaataaagaatagaggtgctgctgcaactgcaaccaatccagat
gaaccaaagaaattaggcacacatagttatcgtcatcaagttatagagccaaaatctgtt
gaacatgatggtgttgtttctacaaagtgtgacccttcttggaaagatatatccaagatt
ggtcaaacttcaaacctagttgttggtgaaagtgagaataaaggagaagaagctgctgca
aaaaatgtggagccaactatagtctcttcctctgtttgttctggcaatggtgcagagagg
ggttcgggtgacccaaatcaaaatttgaagcaaaaaagtagagacactgaggactttgag
tggcaaagtgaagatttagaggaagaatcagttggtgttaaaaaggatgttcctgcacca
cgtgttggctccaagagaaaccgttcagctgaagtgcataatctatctgaaaggagacga
agagacaggattaatgaaaagatgcgtacgttacaagaactcataccaaattgcaataag
gcggataaagcttcaatgttggacgacgcgatcgagtatcttacaacacttcaactacaa
cttcaaataatgtcaatgggaagtggtttatgcatgcctgcaatgatgttacctccggga
atgcaacacatgtatggttcaccacatatgagcccttattcaggaataggtgttggcatg
caaatgaggttaggaatgggcatgcatgatggtaacgatgagtgttatagatttccaatg
attcaaggaaatcaacatacacaagtgtttgggctccccatgccaatgccacatgctccc
atcttttccttttcagcagatcaaccttttatgagcccatcaactttagggttaaatgca
tgtgaaactatggatccaatgcctcaacatgtacaaaacaacaacgcttgttcaacgaat
caggtgttgctataa
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