Cajanus cajan (pigeon pea): 109804726
Help
Entry
109804726 CDS
T04868
Name
(RefSeq) ABC transporter I family member 21
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109804726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109804726
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109804726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
AAA_15
AAA_28
AAA
AAA_23
NACHT
SMC_N
AAA_5
AAA_18
SRP54
AAA_22
AAA_33
AAA_30
AAA_25
Zeta_toxin
nSTAND_NTPase5
PduV-EutP
AAA_16
Arf
AAA_24
Rad17
AAA_14
Motif
Other DBs
NCBI-GeneID:
109804726
NCBI-ProteinID:
XP_020222148
LinkDB
All DBs
Position
2:complement(23015909..23019713)
Genome browser
AA seq
299 aa
AA seq
DB search
MNKSLSNGGCTRTLTTMAPEQEDSRGIRVNAMQFSYDVQQPPLFLDFSLDVEPGSRCLLV
GANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKNVGSAG
EIPLQGDFSAEHMIFGVEGADPDRRDKLIDLLDIDLQWRMHKVSDGQRRRVQICLGLLYP
YKVLLLDEVTVDLDVVTRMDLLDFFREECEQREATIVYATHIFDGLETWATHLAYIQDGE
LRRAEKLSDVNELKSTTNLLSVVESWLRAETKLEKKNPVQKTSFASSPFFSSRHMAYYR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatccctctccaatggcggttgcactcgcacactcacaacaatggcgccagag
caagaagattcccgcggaatccgcgtcaacgccatgcaattctcctacgacgtgcagcaa
ccgccgctgttcctcgacttcagcctcgacgtcgaacccggatcgcgctgcctcctcgtc
ggcgccaacggatccgggaagacgactttgctgaagattctggcggggaagcacatggtt
ggaggaagagacgtggtgcgcgtgctcaacggttcagcctttcatgacactcaactcgtt
tgtagcggcgatctcgcttacttgggcggatcctggagcaaaaacgttggctccgctgga
gaaattccgctccaaggagacttctctgcagaacatatgatctttggagttgagggcgct
gatcctgataggagagataagttaatcgatctgcttgatatcgatctgcagtggcgaatg
cataaggtatccgatgggcagcggcgtcgagtgcaaatttgtcttggtcttctttatcca
tataaggttctcttgctggatgaggttactgttgatctggatgttgttacccggatggat
ttattggacttctttagggaagaatgtgaacagagagaagctacaatcgtatatgcaact
catatttttgatggactagagacgtgggcaactcatttggcatacatacaagatggtgaa
ctgagaagagctgaaaaattatcagatgttaacgagttgaaatctacaactaatctgctg
tctgttgttgagtcctggctccgtgctgaaacaaagcttgaaaagaagaaccctgtccaa
aagacttcttttgctagttctccattcttttcatccagacacatggcgtactatcgatag
DBGET
integrated database retrieval system
