Cajanus cajan (pigeon pea): 109808333
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Entry
109808333 CDS
T04868
Name
(RefSeq) transcription factor PIF3
KO
K12126
phytochrome-interacting factor 3
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04075
Plant hormone signal transduction
ccaj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109808333
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109808333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaj03000
]
109808333
Transcription factors [BR:
ccaj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109808333
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109808333
NCBI-ProteinID:
XP_020226875
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Position
11:41544090..41549810
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AA seq
733 aa
AA seq
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MPLYELYRLAREKLGKETNSTRAPDQCSSPENDFFELIWENGQISSQGQSSRVRRSPSCK
SLPSHCLPSHSPKSRDRDVGYGANTRMGKFGDLDSGLDGIQMSVPSREVDFCQDEDVLPW
LDYTTMDGSLQHEYGSDFLPASNSFTQLDKKSNGNMVFRDSHKTSEEQGNVFKGSSDEHV
ETARPKSSTSQLYSPSLHQGQTSFVPSRSRALDITENNNASNANQDASYGEITHILSSSS
DFSSLKVQKQDPPMPSNGSSSTIMNFSHFARPAAIVRANLQNIGLKSGLSSARSDCMEIK
NKGAVPTSSNPPESILVDSSGECSKELTMDIQQVVEKSKADLNSLQPKSVEQDAVPSKQL
EPVCKESATKIDQTPNQVLGDSGAKGQTAAEKSMEPTVASSSVCSGNGADADRGSDEPNQ
NLKRKRKDTEDSECHSEDVEEESMGVKKAVGGRGGTGSKRSRAAEVHNLSERRRRDRINE
KMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPAGMQHMHA
PHMAPFSPMGVGMHMGFGMGYGMGMPDMNGGSSRFPMIQVPQMQGTHIPVAHMSGPTSLQ
GMARSNPPGFGLPGQGHPMPMLRAPVFPFSGGPHVNKSALGLHACGSSGVVETVDSASAS
CLKDQMPNVDPHVKQITGGCDSTSQMPTQCEAAAGFEQSALAHSSGGHASNPNDKVAVNP
GPGKEDNLVIGYD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtatgagttataccggctggctagggagaagcttggaaaagagactaacagc
acacgtgcacctgatcaatgttcctcgcctgagaatgatttctttgagctcatttgggag
aatggtcagatttcgagccagggtcagtccagtagagttaggaggagtccatcttgcaag
agtttgccatctcactgtttaccatctcatagtcccaaaagtagggatagagatgttgga
tatggtgccaacacaaggatgggaaaatttggggatttagactctggattggatggaatt
caaatgtcagtgccgtcccgcgaagtggatttctgtcaagatgaagatgtgttaccttgg
ttagattatacaacgatggatggttccttgcaacatgaatatggttctgatttcctccct
gcctcaaatagttttactcaattggataaaaaaagtaatggtaatatggtattcagggat
tctcataaaacttctgaagaacaagggaatgttttcaagggttcttcagatgaacatgtt
gagacagctagacctaaatctagcaccagtcagttatactccccatcattgcatcagggt
caaacatcatttgtaccttctagatccagagcattggatataactgaaaataataatgcg
agtaatgcaaaccaggatgcgtcttatggcgaaattactcatattctatcttcgtcgagt
gatttttctagcttaaaggtgcagaagcaagatccacctatgcctagcaatggttccagt
tccaccataatgaatttctcccattttgcaaggcctgctgctattgtaagagctaatctt
cagaacattggcttgaagtctggtttgtcttcagcaagatcagactgtatggaaattaag
aataaaggtgctgttccaactagcagcaatcctcctgaatcaattctggttgattcaagt
ggtgaatgttcaaaggaactgaccatggacatccagcaggttgtggagaaatccaaggcc
gatttgaactctttgcagccaaaatctgttgaacaggatgctgtgccttctaagcagttg
gaacctgtttgtaaagagagtgccactaagattgatcaaactcccaatcaagttcttggt
gacagtggtgctaaaggacagacggctgctgaaaaaagtatggagccaacagtagcctct
tcctctgtttgctctggcaatggtgcagatgcagacagaggttcagatgagccaaatcaa
aatttgaagcgaaaaagaaaagatacggaggactctgagtgtcatagtgaagatgttgaa
gaagaatcaatgggtgttaaaaaggccgtcggtgggcgaggaggtacaggttccaagaga
agccgtgcagctgaagtgcataatctatctgaaaggaggcgaagagacaggatcaatgag
aagatgcgtgcattacaagaactcataccaaattgcaataaggtggataaagcttcaatg
ctggacgaggcaattgagtatcttaaaacacttcagctccaagttcaaattatgtcaatg
ggagctggtttatatatgcctccaatgatgttacctgcaggaatgcagcatatgcatgca
ccacatatggctccattttcacctatgggtgttggcatgcatatgggttttggtatgggt
tatggaatgggcatgcctgacatgaatgggggatcttcaagattcccaatgattcaggtg
ccacaaatgcaaggaactcatatccctgttgcacatatgtctggacccacttctttacaa
gggatggctagatcaaatcctccagggtttgggcttcctggacaaggacatcccatgcca
atgctgcgagctcctgtatttcctttttcgggagggcctcacgtgaacaaatcagctctg
ggactacatgcctgtggatcatcaggagttgttgaaactgtggattcagcttctgcttct
tgcttaaaagatcaaatgccaaatgttgacccacatgttaagcaaatcactggtggatgt
gattcaacaagtcagatgcctacccaatgtgaagcagctgccggatttgagcaatctgct
ttggcacatagtagtggtggtcatgcctccaaccctaatgacaaagtagcggttaatcct
ggtcctggcaaagaagataaccttgtgatcggttatgattga
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