Cajanus cajan (pigeon pea): 109812180
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Entry
109812180 CDS
T04868
Name
(RefSeq) tRNA pseudouridine(38/39) synthase isoform X1
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaj03016
]
109812180
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
109812180
Transfer RNA biogenesis [BR:
ccaj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109812180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Myo5a
bZIP_1
DUF6183
Motif
Other DBs
NCBI-GeneID:
109812180
NCBI-ProteinID:
XP_020231668
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MATQPSDAELIATLQARVKELETENAKLLSQLADCGSHEMEKKLHVPDEKGRESRKGNRK
SEEKIEKNSGYNTRFMSHHSKRYVALKVMYFGKRFYGFASEAQMEPTVESELFKALEKTR
LLIGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISATNNGNSGVVLDEHEGEIDYV
RVLNRVLPNDIRVLGWCPAPVDFHARFSCLSREYKYFFWKEQLNIQAMENAGNKLVGEHD
FRNFCKMDAANVHNYRRHIMLFDISPSDVRYNGNQLWVIKIRGSAFLWHQVRCMVAVLFM
VGKGLESPNVIDMLLDTTRILRKPQYTMASEVPLVLQSCEFDDIKFMCSSDAGEALRVHL
VNECQIYQLQAAVFHEALLNCVPVSNDQRLLSFQGSKKKVSHIPLMSRPTEPSYEERRAK
LNTGA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcaaccgagcgatgcggaacttatagccaccttgcaagccagggtcaaggaa
ttagaaactgagaatgcgaagctgttatctcaacttgctgattgcggcagtcacgagatg
gagaaaaaattacatgtccctgatgagaaaggcagggagtcaagaaaaggcaacagaaaa
tctgaagagaagatagagaaaaattcaggctataacacaaggtttatgagtcaccatagc
aagagatatgtggctttaaaagtcatgtactttggtaaaaggttctatggttttgcttca
gaggcacaaatggaaccaacagttgagtctgaactttttaaagcccttgagaaaacaagg
ctattgattggtgataagaaggagtcacagtattcaagatgtggtcgaacagacaaagga
gtttcctctgttggacaagtgatagctcttttcctaagatcaaacctcaagatatctgca
acaaataatggaaattctggagttgttttagatgaacatgaaggggaaattgattatgtg
agggtgctaaatcgagtccttccaaatgacattcgagttttgggttggtgtcctgctcct
gttgattttcatgcaaggttcagctgtttgagcagggagtataagtatttcttttggaaa
gagcagttgaacatccaggccatggagaatgctggaaacaaacttgttggagaacatgac
tttagaaacttctgtaaaatggatgcagcaaacgtgcacaactataggcggcatatcatg
ttgtttgatatttctccttcagatgtgaggtacaatggtaatcaactttgggtgattaaa
ataagaggtagtgcttttctatggcatcaggtccgctgtatggttgctgttctatttatg
gttggcaaaggtcttgaatctccaaatgtgattgatatgctgctggacactactagaatc
ctaaggaaacctcagtacactatggcttcggaggttccgttggttcttcagtcctgtgaa
tttgacgacattaagtttatgtgttcatcagatgcgggagaagcgttgcgtgtacacttg
gtgaatgaatgccaaatttaccagcttcaagctgcagtttttcatgaagctcttcttaat
tgtgtgcctgtttcaaatgatcaaaggttgctttcttttcaaggatccaagaaaaaagtt
tcccatatccctcttatgtcacgaccaactgagccatcatatgaagagcgccgtgccaaa
ctcaacacaggtgcatga
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