Cajanus cajan (pigeon pea): 109817394
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Entry
109817394 CDS
T04868
Name
(RefSeq) DNA repair protein RAD16 isoform X2
KO
K15083
DNA repair protein RAD16
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109817394
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
109817394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C2HC_2
Prok-RING_4
zf-rbx1
zf-RING_6
zf-RING_Vps41
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
109817394
NCBI-ProteinID:
XP_020238219
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MELRSRRRLSNTTVSGKEEQPEDDAVVKDETNGGCGNNKDKGVSVVSSDSDIVSDPDSGS
DFEDEELGGCVLPDLNEEPYSSISVYDLEDYASDSSDGGKPLSKRENVWGCKRRRTGPNP
EIGEPSDVVEVVEHKDGDDDEYSMVQQRSVPSASRETKKRKYTRRGKKGDSRPVLLWNAW
EEEQERWIDKNISEDADLDNHGEVMNETAEAPSDLTMPLLRYQKEWLAWALKQESSESRG
GILADEMGMGKTIQAIALVLAKREFEERSSEPDQSIPSSSRLLPVIKGTLVICPVVAVTQ
WVSEIDRFTLKGSTKVLIYHGANRWKSGDRFADYDFVITTYSVVENEYRKHMMPPKERCP
YCGKLFLPSKLRYHQNYFCGPDAIRTEKQSKQAKKKCSLVTKGKTKVCDGNKMSKGSKKK
KEEETDMIMEDTEAVPVRADKSLLHAVKWQRIILDEAHYIKSRHCNTAKAVLALESTYKW
ALSGTPLQNRVGELYSLIRFLQIIPYSYYLCKDCDCKILDHSSKECSGCIHSSVRHFCWW
NKYVATPIQSFGNGDSGRRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRKDCLD
IKEQDYYESLYNESQAQFNTYVEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSQSAASR
NGVMESNATVEQVCGICHEPVEDVVVTSCEHVFCKACLIDFSASLGQASCPTCSKLLTVD
LTSNKDVGDQAYKTTIKGFRSSSILNRIRLENFQTSTKIEALREEIRIMVERDGSAKGIV
FSQFTSFLDLINYSLHKSGVSCVQLNGSMSLAARDAAIRRFTDDPDCKIFLMSLKAGGVA
LNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKE
LVFEGTIGGSSDALGKLTESDLRFLFVT
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgtcggcgcctttccaatactacagtttctgggaaggaggagcag
cctgaggatgatgctgttgtgaaagatgaaactaatggcgggtgcggtaacaataaagat
aaaggtgtttctgttgtatcttcagattcggatatagtttctgatcctgattcaggttct
gacttcgaagatgaagaattgggtgggtgcgttctacctgacttgaatgaagaaccatat
tcaagcattagtgtttatgatttagaagattatgcttctgattcgtctgatggtggcaag
cctttgtccaaaagggagaatgtgtgggggtgcaaacggagaagaacaggtcccaaccca
gaaattggagaaccaagtgatgtggttgaagtggtggaacacaaagatggtgatgatgat
gaatactctatggttcagcagcgatcagttccctctgcttcgagggaaactaagaagagg
aaatatacaagaagaggcaaaaaaggagattctcggccagtgttgttgtggaatgcgtgg
gaagaggaacaagaaagatggattgataagaatatatcagaagatgctgacttagataat
catggtgaagtaatgaatgaaactgctgaggcgccctctgatctgactatgcctttactt
agataccaaaaggaatggttagcctgggctttgaaacaggaaagttctgagagtagaggc
ggaatacttgcagatgaaatgggaatggggaaaactattcaagcaattgcccttgtccta
gccaaacgtgaatttgaagaaaggagttctgaaccagatcaatccataccaagttcatcc
agattgttacctgtgatcaaaggaacacttgtcatatgtcctgtggttgctgtcactcag
tgggttagtgagattgatcgctttactttaaaagggagcaccaaggtgctaatttatcat
ggggctaatagatggaagagtggggatcggtttgcagattatgattttgtgatcactaca
tactctgtcgttgagaatgagtacaggaagcatatgatgcctcctaaagagaggtgccca
tattgtggaaaattatttttgccaagtaagttgagatatcatcaaaactatttttgtgga
cctgatgctattagaacagaaaaacaatcaaagcaagctaagaaaaagtgtagtttagtt
actaaagggaagaccaaggtatgtgacggtaacaagatgtcaaagggttctaaaaagaaa
aaggaagaagaaacggacatgattatggaggatacagaggctgtccctgtacgtgcagat
aagtcacttctgcatgctgtaaaatggcagcgaattatattggatgaggcgcactatata
aaatctaggcattgtaacaccgctaaagcagttcttgctttagagtctacctacaaatgg
gcgttaagtggcactccccttcagaaccgagttggagagctgtattctctgatacggttc
ctgcaaataattccttattcctattacttgtgcaaggactgtgattgcaagattcttgat
catagctctaaagaatgttcaggctgcattcacagttctgtgaggcatttctgttggtgg
aataagtatgttgccacaccaattcaatcttttggaaatggtgattctggtagaagagct
atgatattgcttaaacataaagttttgaagaacatagtattaaggcgcactaaaattggg
agggctgctgatcttgcgcttccgcctagaattgtttcattgagaaaggactgtctggat
attaaagagcaagactattatgaatcgttatataatgaaagtcaggcacaatttaataca
tatgttgaagcaaatactctgatgaataattatgcccatatatttgacctcctcacccgt
ctgcgacaggccgttgatcatccataccttgtggtatattctcaaagtgcagcatcaaga
aatggagttatggaaagtaatgctactgttgaacaggtttgcggcatttgccatgagcca
gtagaagatgttgtagttacctcttgtgagcatgtattttgcaaggcatgcttgatagac
ttctctgcttccttggggcaagcatcatgccctacgtgctctaaattacttactgttgat
ttaacgtccaacaaggatgttggggatcaggcttacaaaacaacaattaagggattcaga
tcctcaagcattttgaatagaattcgacttgagaactttcagacaagtactaaaatagag
gctttgagagaagaaataaggatcatggttgaaagggatggttctgccaaagggattgtt
tttagccaattcacatcattcttggatcttataaattactctttacacaagtctggagta
tcttgtgttcagttgaatggaagcatgtcattggctgctcgggatgctgccattcggaga
ttcactgatgatccagactgcaaaatttttctcatgagtttgaaggctggaggtgttgca
ctcaatttgactgtagcttcacatgtcttccttatggacccttggtggaaccctgctgtg
gagcgtcaggctcaagacagaattcaccgaatagggcaatataaacctataaggattgtg
aggtttgtcattgagaacacaatcgaggagagaattctgaagctgcaagagaagaaggaa
ttagtgtttgaagggactataggtggctcttctgatgctctggggaaattgactgagtca
gacttgagatttttatttgttacctaa
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