Cajanus cajan (pigeon pea): 109818122
Help
Entry
109818122 CDS
T04868
Name
(RefSeq) transcription factor PIF1
KO
K16189
phytochrome-interacting factor
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109818122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaj03000
]
109818122
Transcription factors [BR:
ccaj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109818122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109818122
NCBI-ProteinID:
XP_020239115
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MNDCVPDFEIQMEEEEENPIPVSKKASTQNDDIMELLWQNGQVVMQSQNQRPIRKPPREI
RSSEPQNYANNQHLFMQEDEMASWLHYPIHQDPPPLDHHNFSADIFYPPPNAALQCSVRA
DHLRHPPPRPPIPPPSRMHNFVHFSKHANASLSSKVAAAQPTVVDSCDTPVATADRVETA
RASGGKPAAPGGGRETATCDMTVTSSPGGSSGSAEPDQREAAVDRKRKGREAEESEFQSE
DVDFESPEAKKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS
MLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPPMGMGIGMGMGMEMGMGMNRPV
MTFPNMLASSTLPAATAAAHLGPRFPMPPFHMPHVAAPDSSRVQAANHSDNTMLNSHGTL
DPDQSRIPNFTDPYHQYLQLMQAMNQPNVSKPSTSRGQENPEKHQSDET
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactgtgttccagatttcgaaatccaaatggaggaagaggaagaaaacccaatt
cctgtctcaaagaaagcttctacgcaaaacgacgacatcatggaactcttgtggcaaaac
ggccaggtcgtcatgcaaagccaaaaccaacgacccatcagaaaaccgccgagggagatt
cgatcctccgagccacaaaactacgctaataaccaacacctgttcatgcaagaagacgaa
atggcttcgtggctccactatccaatccaccaagatcctcctcccttagatcaccacaat
ttttccgccgacatcttctacccgccgccaaacgccgccctgcaatgctccgttcgcgcc
gaccacctccgccatccgcctcctcggcctccgattccgccgccgagcaggatgcacaat
ttcgtgcacttctccaagcacgccaatgcgtcgctcagttcgaaggtcgcggcggcgcag
cccacggtggtggattcgtgcgacacgccggttgccacggcggaccgcgtggaaaccgcc
cgagcgagcggcggtaaaccggcggcgcctggcggaggaagggagacggcgacgtgcgac
atgacggtgacgtcgtcgcccggcggttcgagcgggagcgccgaaccggatcagagagaa
gcggcggtggaccgcaagaggaagggaagggaagcggaggaatcggagtttcagagcgag
gatgtcgattttgaatctccggaagctaaaaaacaagtccgtggttctacatctacaaag
agatctcgtgctgctgaggtccataatctctcagagaggaggcgacgagatagaattaat
gaaaagatgaaagctttgcaagaacttatacctcggtgcaacaagtctgacaaagcttcg
atgctggatgaagcaattgagtacttgaagtcactgcaattacaagtgcagatgatgtcc
atgggatgtggcatggtgcctatgatgtttcctggaatccagcagtatatgccgccaatg
ggaatgggcattggcatggggatgggcatggaaatgggaatgggaatgaacagacctgta
atgacatttccaaatatgttagctagttcgactttgccagcggcaactgcagctgctcat
ttgggaccaaggttccccatgcctcctttccatatgcctcatgttgccgcacccgattca
tccagagtgcaagcagcaaatcactcagacaatactatgcttaactcacatggtacacta
gatccagatcaatcacgtatcccaaacttcaccgatccttatcaccaatacctacaatta
atgcaggcaatgaaccaaccaaatgtcagcaagcctagtaccagtaggggtcaagagaat
ccagaaaagcatcagtcagacgaaacatga
DBGET
integrated database retrieval system
