Castor canadensis (American beaver): 109680796
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Entry
109680796 CDS
T04791
Symbol
Rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04015
Rap1 signaling pathway
ccan04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
109680796 (Rapgef6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109680796 (Rapgef6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109680796
NCBI-ProteinID:
XP_020011067
UniProt:
A0A8B7TW73
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNIIYSYLHGMEILSNLREHQLRLMSARARYERYSG
NQILFCSETIARCWYILLSGSVLVKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNDDSILQREIPARQSRRRFRKINHKGERQTITDDVDVNSYLCLPADLTKMHLTDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGTVDSEDEEEEEEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAVILEDGQELDSWYVILNGTVEISHPDGKIENLFMGNSFGITPTLDRQYMRGIVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSDKGFGIFVEGVEPGSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLAVTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDIEQTSQDKG
NKKIKANTVSGGRNKIRKILDKTRLVSCLQKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHA
VHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNAHL
KEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
PVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQG
STNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSGLDVETDEEKFQMMSL
QWEPAYGTLTKNLSEKRLAKSSEMSPVPLRSAGQTTKAHLHQPHRVSQVLQVPAVNLHPT
RKKGQARDSALSACLPQKAIGPTEEVSSKKHTEDAISVASSLHSSPPASPQGSPRKGYTL
IPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAALQDDRCLSQPLTVPESTGALEKTDH
PPGIGDHSQLGPGWTLIKPSLIKGLAISSSVSNEEISHEHVVIEAADSGRGSWTSCSSSS
HDNFQSLPNPKSWDFLNSYRHTHLDDPIAEVEPTDCEPCSCPKGCSRTCGQCKGSRETSQ
LRQSWASSSSLSDTCEPNYGTIKRRVLESTPVILNPKDTTDPVYKTVTSSTEKGLIVYCV
TSPKKDDRYREPPPTPPGYMGISLADLKEGPHPHLKPPDYSVAVQRSKMMYNSLAGLPPA
SLSSNPGACVPSKIITQPHRHNLHPSHPKLDVTDADSEADENEQVSAV
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacccgtggaccctggcgctaggcaggcgctgaagaagaagccgccagaacgg
acccccgaggacttaaatattatttattcttatcttcatggaatggaaatattatcaaat
ctcagggaacatcaacttaggttaatgtctgcaagagcacgttatgagagatacagtggt
aatcagatccttttttgttcagaaactattgccagatgttggtatattctactttctgga
tctgtacttgtgaaagactcgatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtgttagagccttcagaaatgattgtggtagagaat
tccaaagataacgacgatagtattcttcaaagagaaattcctgccagacagtctcgacga
aggtttcggaaaattaaccataaaggagagcgccaaaccataactgatgatgtggacgtt
aacagctatctttgtcttccagctgatcttacaaagatgcacctcacagacaaccctcac
ccgcaggtgactcacgtgtcctctagtcagtctggttgtagcattgccagtgattctggg
agcagcagtttgtctgatatctatcaggctacagagagtgaggtaggagatgtagattta
acacgtcttccagagggaactgttgattctgaggatgaagaagaggaagaggaagagatt
gatcgaacagatccattgcaggggcgagatctagttcgagaatgtcttgaaaaagaacca
gcagacaaaactgatgatgacattgaacagttacttgagtttatgcaccagctccctgct
tttgcgaacatgactatgtctgtaaggagagagctctgctcagtgatgatttttgaagtg
gtggaacaggctggagctgttattctggaagatgggcaagagcttgactcatggtatgtt
attttaaacggcactgtagaaattagtcatccagatggaaaaattgaaaatctcttcatg
ggaaacagttttgggattactcctactctggataggcagtacatgcgtggaattgtcagg
actaaagtagatgattgtcagtttgtctgcatagcccagcaggattattggagaatttta
aatcatgtggaaaaaaatacccacaaagttgaggaagagggagaaattgttatggtgcat
gaacaccgtgaactagaccgcagcgggaccaggaaaggacacattgtaatcaaggcaaca
cctgaacgtctcatcatgcatctaatagaagaacattccattgtggacccaacttacata
gaagatttcctgttaacttacaggacatttcttgaaagccctttggatgttggaatcaag
ctgttggaatggtttaaaattgacagcttaagggataaggtgacacggattgtattacta
tgggtaaataatcattttaatgattttgaaggtgaccctgctatgactcgatttctagag
gaatttgaaaaaaatctggaagatacaaagatgaatggtcatctccggttactgaatatc
gcctgtgctgcaaaggctaagtggagacaggttgtgctgcaaaaggcttctcgagagtcc
cctctacatttcagtcttaatggaggaagtgacaagggctttggtatatttgttgaagga
gtagaacctggtagcaaagctgctgatgcaggactgaaacgtggtgatcagataatggaa
gtaaatggacaaaattttgagaatattacatttgtgaaggcccttgaaattttgaggaat
aatacacatcttgcagttactgtgaagaccaatatttttgtgttcaaagaattacttagt
agaactgaacaagagaagtctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aatcgccattcaatccaagatgtaccaggagacattgaacagacatcacaggataaagga
aataagaaaattaaagcaaataccgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacgattagtatcctgcctccaaaaactgttcagtgatggaggcctcagccaa
tcacaagatgatagcattgtgggaacaaggcattgtcgacacagcctggctataatgcct
attcctggaacactctcatccagcagccctgatctcctacagcctaccaccagcatgttg
gatttttccaatccttcagatattcctgaccaagttataagagttttcaaagcagatcaa
caaagttgctacattatcatcagtaaagacacaacagctaaagaagtagtttgtcatgct
gttcatgaatttggcttgactggtgcatctgacacatattctctctgtgaagtttctgtt
actcctgagggtgtcataaagcagagaagacttccggaccagttctccaaattagctgat
agaattcaactcaatggaaggtattatttaaaaaataacatggaaacagaaacattatgt
tcagatgaagatgctcaagaactagttaaagaaagtcagctatccatgctgcagctcagt
accattgaggtggcgacccagctatcaatgagggactttgatttatttcgtaatattgag
cctactgaatacattgatgacctttttaagttagattccaaaacaggaaatgctcacttg
aaagagtttgaggacattgtaaaccaagagacattttgggttgcctcagagattttaact
gaatctaaccagctcaaacgaatgaagattattaagcattttattaaaattgctcttcat
tgtcgagagtgtaagaacttcaattctatgtttgcaataataagtggcttgaacctggca
cctgtagcacgactcagaggtacttgggaaaaattaccaagcaaatatgagaaacatctc
caagatctacaggacctttttgacccatctagaaacatggcaaaatacagaaatatcctt
agtagtcagagcatgcagcctccaattatccctctcttccctgtcgtcaagaaagacatg
acatttttgcatgaaggaaatgactccaaagtagatggtttagtaaactttgagaagcta
agaatgattgctaaggaaattcgtcaagttgtccgaatgacttctgctaacatggaccca
gctatgatgttccgacagaggaagaagaggtggcggagtctggggtcattgagtcaaggc
agcacaaattcaaacatgctggatgttcagggaggtgctcacaaaaaacgagcacgccgt
agctctctgcttaacgctaagaagctgtatgaggatgcccagatggcaaggaaagtgaag
caatatctttctggtctggatgtagagactgatgaagaaaagttccagatgatgtcattg
cagtgggagcctgcgtatggtaccttgaccaagaatttaagtgagaaaagattagccaaa
tcatctgaaatgtctccagtacctttgaggtcagctggccaaacaactaaagcccacctg
catcagccccacagggtgagccaggtgctccaggtgccagctgttaacttgcaccccacc
aggaagaagggacaagcaagagactctgcactgagtgcatgtttacctcagaaagctata
gggccaactgaagaagtaagtagtaagaaacatacagaagacgcaatttcagtggcttca
tctttacattccagtcctcccgcatctcctcaaggctcccctcgcaaaggttatacactt
ataccatcagctaaatctgacaacttgtctgactccagccatagcgagatttcttcacgg
tccagcattgtgagcaactgctctgttgactccatgtctgcagctctacaggatgatcgg
tgtttgtcccagcccctgacagtccctgaatccacaggggcattggaaaagacagatcac
cctccagggataggagaccacagtcaacttggtcctgggtggacactcataaaaccatct
ttaatcaagggtttagccatctcgtcttctgtgagcaatgaagagatttctcatgagcat
gttgttatagaagcggccgacagtggtcgaggaagttggacttcctgttcaagcagctca
catgacaacttccaaagccttccaaacccaaaaagctgggactttttgaactcttacaga
catacccatttggatgaccccattgctgaagttgaacccactgactgtgagccctgttcc
tgccctaaaggctgctcaagaacttgtggacagtgtaaaggaagccgagagaccagtcag
ctgagacagagttgggcatcttccagttctctgtctgacacatgtgaaccaaactatggg
acaatcaagcggagagtgctggagagcacccctgtcatcttgaaccccaaggataccacc
gaccctgtttataaaactgttacttcaagtacagaaaagggcttaattgtgtactgtgtc
acctcacccaagaaggatgataggtatagggagccacctcctactcctccaggatatatg
ggaatttctttagcggacctaaaagaaggaccccacccgcacctaaaacctccagattat
agtgtggcagtgcagaggtcaaagatgatgtacaacagccttgctgggctgccaccagct
tctctcagtagcaaccctggggcctgtgttccatcgaagatcataacccagcctcacagg
cataatttgcatccatcccatcccaagctagatgtgactgatgcagatagcgaagcggac
gaaaatgaacaggtgtcagcagtctag
DBGET
integrated database retrieval system
