Castor canadensis (American beaver): 109681205
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Entry
109681205 CDS
T04791
Symbol
Setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan00310
Lysine degradation
ccan01100
Metabolic pathways
ccan04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109681205 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
109681205 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccan03036
]
109681205 (Setdb1)
Enzymes [BR:
ccan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
109681205 (Setdb1)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109681205 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
109681205 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
109681205
NCBI-ProteinID:
XP_020011405
UniProt:
A0A8B7U186
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MSSLPGCIGLDAATAAVECEEIAELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSTQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPIVPPAPPAPPLSPQAGDNESLESQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSETVPGGKPGINQMYRSPLGSTTSAPAPTA
PPCPPVSEESPLGSTTSVSAPPALPGPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYT
CLSRIRPMRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEI
ERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTP
PPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINP
NSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLD
DIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDVPCSSDSS
GVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSE
TASKDSRPPDLGPPHIPIPPSISGGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSR
SSFKTGEVGEGRTGGGRGEAEKASTSGLGIKDEGDIKQAKKEDSDDRNKISVVTESSRNY
NYNPSPMKPEGLRRPPSKTSMHQSRRLMASAQSNPDDVLTLSSSTESEGESGNSRKPTAG
QTSATAVDSDDIQTISSGSEGDEFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTN
MASVDKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHD
LRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctggctgcattggtttggatgcagcaacagctgcagtggaatgtgaa
gagattgcagagctgcaacaggcagtggttgaggagctgggtatctctatggaggaactt
cggcagttcattgatgaagaacttgaaaagatggactgtatacagcagcgcaagaagcaa
ctagcagagttggagacatgggtaatacagaaagagtctgaagtggctcatgttgaccag
ctctttgatgatgcttccagggcagtgactaattgtgagtctttggtgaaggacttctac
tcgaagctaggactacagtaccgtgacagtagctctgaggatgaagcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtccttagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatca
gctcaagatgtccagaagttcatggatgctgttaacaagaagagtagtacccaagatctg
cataaaggaaccttgagtcaaatgtctggagaactgagcaaagatggtgacctgatagtc
agtatgcggattttgggcaagaagagaactaagacatggcacaaaggcaccctaattgct
atccaaacagttgggccagggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctgctgtcgggaaaccatattgcatacgattatcaccctcctgctgacaagctgtatgtg
ggcagtcgagtggtggctaaatacaaagatgggaatcaggtctggctttatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtcagaactatatcccatttgccggccattgaaaaagact
tgggaggatatagaagacatctcctgcagagacttcatagaggaatatatcactgcgtac
cctaaccgtcccatggtgctgctcaagagcggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgtgttgaggaagtggatggcagcctagtcagaatcctcttcctg
gatgacaaaagatgcgagtggatctatcgaggctctacacggttggagccaatgttcagc
atgaaaacatcctcagcctctgcactagaaaagaaacaaggcgggcagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgttgtccaatacacacaggatttgacc
agtactggaacccagtttaagccagtggagcccccacagcccatagttccacctgcccca
cctgctccacctctgtctccccaagcaggtgacaatgaaagcttggaaagccagcttgct
cagtcacggaagcaggtagccaaaaagagtacatcattccgtccaggatctgtgggctct
ggtcattcctcccctacatcccctgcactcagtgaaactgtccctggtgggaaacctggg
attaaccagatgtacagatcacctttaggctcaacaacctctgccccagcacccacagct
cctccatgtcctccagtcagtgaagaatcacctttgggctctacaacctctgtttcagca
cctccagctcttccaggtccaccagccttccatggcatgctagagcgggccccagcagag
ccctcctaccgtgcccccatggagaagcttttctatttgcctcatgtctgcagctatact
tgtctgtctcggatcagacctatgagaaatgagcagtaccgaggcaagaaccctttgtta
gtcccactactatatgactttcggaggatgacagcccgacgccgagttaaccgcaagatg
ggctttcatgttatctataagacaccctgtggtctctgccttcggacaatgcaggagatt
gaacgttacctatttgaaactggctgtgacttcctctttctggagatgttttgtttggat
ccatatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggac
atcacctatggcaaagaagatgttcctctgtcttgtgttaatgagattgacacaaccccc
ccaccccaggtggcctacagcaaagagcgtatcccaggcaagggtgttttcattaacact
ggccctgaatttctggttggctgtgactgcaaggatggttgtcgggacaagtccaagtgt
gcctgccatcagctaactatccaggctacagcctgcaccccagggggccaaatcaaccct
aactctggctaccagtacaagagattagaagagtgtctaccaacaggggtttatgagtgt
aacaaacgctgcaaatgtgacccaaacatgtgcacaaatcggttggtgcagcatggacta
caggttcggctacagctatttaagacacagaacaagggctggggtatccgctgcttggat
gacattgccaaaggctcttttgtgtgtatttatgcaggcaaaatcctgacagatgacttt
gcagacaaggaaggcctggaaatgggtgatgagtactttgcaaatctggatcatatagag
agcgtggagaactttaaagaaggatatgagagtgatgttccttgttcctctgacagcagt
ggtgtagacttgaaggaccaggaagatggtaacagtggtacagaggaccctgaagagtcc
aatgatgatagctcagatgataacttctgtaaggacgaggacttcagcaccagttcagtg
tggcgcagctatgctacccgaaggcagactcgtggccagaaggaaaatggactatctgag
acagcttccaaggactcccgtcccccggaccttgggcccccacatattcctatccctccc
tcaatctctggagggggctgcaatccaccttcctctgaagaaacacccaagaataaggta
gcctcttggttgagctgcaatagtgtcagtgaaggtggatttgctgactctgatagccgt
tcatccttcaagactggtgaagttggggagggccggactgggggaggccgaggggaggct
gagaaggcctccacctcaggactgggcatcaaggatgaaggagacatcaagcaggccaag
aaagaggactctgatgaccgaaacaaaatatcagtagttactgaaagttctcgaaattac
aattataatccttctcccatgaagcctgaaggacttcgccgcccacctagtaagactagt
atgcatcagagccggcgactcatggcttcggcccagtccaaccctgatgatgtcctgaca
ctgtccagcagcacagaaagtgagggggaaagtgggaacagccgaaagcccactgctggt
cagacttcagccacagcagttgacagtgatgatatccagaccatctcctctggctctgaa
ggggatgaatttgaggacaagaagaacatgtctggtccaatgaagcgccaggtggcagta
aaatcaacccgaggcttcgctcttaaatcaacccatgggattgccatcaaatcaaccaac
atggcctctgtggacaagggggaaagtgcacctgttcgtaagaacacacgccaattctac
gatggtgaagagtcttgctacatcattgacgccaagcttgaaggcaacctgggtcgctac
ctcaatcacagttgcagccccaacctgtttgtccagaatgtcttcgtggatacccatgat
cttcgcttcccttgggtggccttctttgccagcaagagaatccgggctgggacagaactt
acttgggactacaactacgaagtgggcagtgtggaaggcaaggagctgctctgctgttgt
ggagccatcgaatgcagaggccgtcttctttag
DBGET
integrated database retrieval system
