Castor canadensis (American beaver): 109682063
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Entry
109682063 CDS
T04791
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccan03036
]
109682063
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109682063
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109682063
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109682063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
SMC_hinge
Motif
Other DBs
NCBI-GeneID:
109682063
NCBI-ProteinID:
XP_020012648
UniProt:
A0A8B7TYL4
LinkDB
All DBs
Position
Unknown
AA seq
1421 aa
AA seq
DB search
MTLVLPQQARHGGHIYHYYIHGQKEMKYVHSERKFEPFNNIDIEWKGLIRYHSFLYDREN
LPDDPCFPSKLKDEDDDDDCFILEKAARGKRPIFECFWNGRLIPYTSVEDFDWCTPPKKR
GLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNTLFTRILNGQEQRMKIDRE
FALWLKDCHEKYDKQIKFTLFKGIITRADLPSKKQGPWATYSAIEWDGKIYKAGQLVKTI
KTLPLFYGSIVRFFLYGDHDGEVYATGGEVQIAMEPQALYDEIKTVPIAKLDRTVPEKAV
RKYVEDEMARLPDRLSVTWPEGDELLPNEIKPAGTPIGALRKXNXIKKGEAMQKLPGTSH
GGSKKLLVELKVILHTSSGNKEIISHISQHGGKWPYWFKKMENIQKLGNYTLKLQVVLNE
SNADTYAGRPLPSKAIKFSVKEGKPEKFSFGLLDLPLRVGVPFNIPLEFQDEFGHTTQLV
TDIQPVLEASGLSLHYEEVTKGPNCVIXGVTAKGPVNSCQGKNFNLKVILPGLKEDSQIL
KIRLLPGPPHRLKVKPDSEFLVIENGTAFPFQVEVLDESDNITAQPKLIVHCKFLGGPNL
PVYVVDCSSSGTSILTGPAIQVQNIKKDQTLKARIEIPSCKDVLPVEKTIKLLPSSHVAR
LQIFSLEGQKAIQIKHQDEVNWIAGDVMHNLIFQMYDEGEREINITSALAEKIKVNWTPE
INKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFTVRPLPDEPKHLKCQLKGG
KTVQMGQELQGEVVIIITDQYGNQIPAFSPGSLSALSIAGVGLDNSNLKTTLQENTQSIS
VRGIRFIPGPPGNKDLCFTWREFSDFIRVQLISGPPAKLLLIDWPELKESIPVINGRELQ
NPLAVQLCDQWDNPAPVPHVKISLVKASSLKLTPSNQQHKTDEKGRANLGVFIVFAPRGE
HTMQVKAIYNKSTIEGPIIKLMILPDPEKPIRLNVKYDKDASFLAGDVFTDFMVSVISED
DSVIKNINPARISMKMWKLTSNANRPPANAETFSCNKIKDNDKEDGCFYFRDKVIPNKVG
TYCIQFGFMMDKANMLNSEQVIVDVLPNLPMKLVPEIQPATPAVSNVRSVASRTLVRDLR
LSITDNYGNHTGMNLVGSVLATIKGFNEEDTDTPLFIGKVRTLEFPFVNGSADITSLVLA
ENSPGRDSTEYFIVFEPRLSPLSRTLESYILPFMFYNDVKKQQQMAALTKEKDELSKSII
VYRSLFEASKQLLDEMKCQVEEAQLKEAQLRNELKAHNIDMPTTQQMPHIEALLKRKISE
QEELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMVISWHLASDMDCVVTLTTD
AARRIYDETQGRQQVLPLDSIYKKTLPDWKRLEKSESNNLF
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggtcttaccccaacaagccaggcatggtgggcatatttatcattactatatt
catggccaaaaggaaatgaaatacgtacattcggaaaggaagtttgaacctttcaacaat
atagatattgaatggaagggattaatccgctatcattccttcttatatgatagagaaaac
ctacctgatgatccatgctttccgtcaaagttaaaggatgaagatgatgatgatgattgt
ttcatacttgagaaagcagcaagagggaaaagacctatttttgaatgtttctggaatgga
cgattgataccatacacatctgttgaagactttgactggtgtacacctcctaagaagaga
gggcttgcaccaattgagtgctacaatagaatatctggtgcattattcactaatgacaaa
tttcaagtcagcacaaataaactgacatttatggatcttgagctgaaattgaaagacaag
aacaccctttttacaaggattttaaatggacaggagcagcgaatgaaaattgacagagaa
tttgccttgtggctaaaggactgtcatgaaaagtatgacaaacaaataaaatttaccctt
tttaaagggataattacacgtgctgatcttccatctaaaaagcaaggtccatgggcaaca
tactcagcaatagaatgggatggaaaaatttacaaagcaggacagctggtcaaaacaatc
aagacactgcccctcttttacggaagcatagtaagattttttctttatggtgatcatgat
ggagaagtatatgctacaggaggagaagttcaaattgcaatggaacctcaggcactatat
gatgaaataaaaaccgtgccaattgcaaagctggatagaacagttcctgagaaagctgtt
agaaaatatgtagaagatgaaatggcaaggctccctgatagattgtcagtaacttggcct
gaaggagatgaattattgcctaatgagattaagcctgctggaacccccattggtgcgtta
agaaaataaaattgaataaaaaaaggggaagcaatgcaaaagcttccaggaacaagtcat
ggagggtctaagaaactcctagttgagcttaaagttatattacacacttcaagtggaaat
aaagaaatcatttcacatataagtcagcatggaggaaaatggccttactggttcaaaaaa
atggaaaatattcaaaagttggggaattacacattgaaattacaagttgtattgaatgaa
agtaatgcagacacttatgcaggaagaccactaccatctaaagcaattaaattttctgtt
aaagagggcaaaccagagaaattctcttttggtcttctggatcttcctttacgtgttgga
gttccatttaatatccctttggagtttcaggatgaatttggtcatactactcaactagta
actgatattcagccagttcttgaagcaagtggtttatctttacattatgaagaagtaacc
aaaggaccaaattgtgtaattncgggtgttacagcaaagggccctgttaattcttgtcaa
ggcaagaattttaacctgaaggttattctgcccggtttaaaagaagattctcaaattttg
aaaattagactactacctggtccccctcatcgattaaaagtcaaacccgattctgaattt
ttagttatagaaaatgggacagctttcccatttcaggtggaagttcttgatgaatcagac
aacataacagcacaaccaaaattgattgttcattgtaagtttttaggtggtccaaacctt
ccagtctatgttgtggattgcagtagttctggaaccagtattttaacaggacctgcaatt
caagttcaaaatattaaaaaagaccagacactcaaagcaagaattgaaatacctagttgt
aaagatgtgttacctgtggaaaaaactattaagttgcttcccagtagccacgttgcacga
ctacaaatatttagcctagagggacagaaggcaatccagatcaaacatcaggatgaggtt
aattggatagcaggtgatgttatgcataatcttatttttcaaatgtatgatgaaggagaa
agagaaatcaacataacatcagctttagcagaaaaaattaaggttaattggactcctgag
attaacaaagaacacttactacagggtctgcttcctgatgtacaagtaccaacatccgtg
aaagatatgcgctactgccaggtttcattccaagatgatcatgtgtctttggaaagtgca
ttcacagtaagaccacttcctgatgaacccaaacatttaaaatgtcaattaaaaggagga
aaaacagtgcagatgggccaggaacttcaaggagaagtagttataatcattacagatcag
tatggaaatcagattccagcattttcaccaggttctttatctgctttgtcaattgctggg
gttggactagataactcaaatttgaaaactactttgcaggaaaacacacaaagtataagt
gtaagaggcatcagatttattccaggtcctcccggaaataaggatctttgttttacttgg
cgtgagttttctgactttattcgagtgcagctaatttctggacctccagctaaacttctg
cttatagactggccagaactaaaggagtctattccagtgattaatggaagagaattacag
aaccctcttgctgttcaactttgtgatcagtgggataatccagcaccagtaccacacgtt
aaaataagtcttgtaaaagctagtagtttaaagctcacgccttcaaatcaacagcataaa
acagatgagaaaggcagggctaacttgggagtgttcattgtttttgcccctaggggagaa
catactatgcaggttaaagccatctataacaagagtaccatagaaggacctataattaag
ttaatgattcttccagaccctgaaaaacccattcgactcaatgttaaatacgacaaagat
gcttcctttttagcaggggatgttttcactgattttatggttagcgttatttctgaagat
gacagtgtcatcaaaaatattaatccagcacgtatttccatgaaaatgtggaagctgact
agtaatgcaaaccgaccacctgcaaatgcagaaacatttagttgtaataaaataaaggat
aatgacaaggaagatgggtgcttctatttcagggataaagtaattcctaacaaagtgggg
acatactgtatccagtttggttttatgatggataaagctaatatgctcaacagtgaacag
gttatagttgatgttctgcctaatctgcctatgaagttggttcctgaaattcaaccagct
accccagctgtctctaatgttcgctcagttgccagtaggaccttggtcagagacttacgt
ctcagtattacggataattatggcaatcatactggaatgaatttggttggcagtgtatta
gctaccattaaaggttttaatgaggaagatactgatacccccctctttattgggaaagtt
agaacactcgaatttccctttgtgaatggttcagctgatattacgagtctagtgctggca
gaaaatagccctggaagggatagtactgaatactttattgtttttgagcctcggctatca
cctttatcaagaacattagaatcatatatcctaccatttatgttttacaatgatgttaag
aaacagcaacaaatggcagcacttacaaaagaaaaggatgagttatctaagtctattatt
gtgtatagaagcttatttgaagccagcaaacaacttcttgatgaaatgaaatgccaagtt
gaagaagcacaattaaaagaggcccagttgagaaatgaactaaaagcacataatattgat
atgcctacaacacaacagatgcctcacattgaagcacttttgaaaagaaagatatctgaa
caggaagaactaaagaaaaagcctagaagatcatgtactcttccaaattatactaaaggc
agtggagatgttttaggaaagattgcacatctcgcacaaattgaagatgatagagctgca
atggttatttcttggcatctggcaagtgacatggactgtgtggttaccctaaccactgat
gctgcacgtcgcatctatgatgaaacccaaggtcgccaacaggtgttaccccttgattct
atttataagaagactctgccagattggaaaaggttagagaaaagtgagagtaataatctt
ttctaa
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